Cow genome map
| Conread name: | Ss1.1-Mixc-0038,n17.5 |
| Conread position: | 16-135 |
| Cow position: | chr23:22948035-22948151 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 17-138 |
| Cow position: | chr23:21236088-21236209 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-135 |
| Cow position: | chr23:5385315-5385432 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 18-135 |
| Cow position: | chr23:21263040-21263154 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 18-136 |
| Cow position: | chr23:21278740-21278856 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 133-414 |
| Cow position: | chr23:22932419-22932700 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 81 |
| Conread position: | 134-415 |
| Cow position: | chr23:5390958-5391241 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 136-420 |
| Cow position: | chr23:21283950-21284237 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 165-374 |
| Cow position: | chr23:5464267-5464058 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-414 |
| Cow position: | chr23:21242372-21242621 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 167-414 |
| Cow position: | chr23:5448991-5448744 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 407-588 |
| Cow position: | chr23:5398918-5399099 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 411-586 |
| Cow position: | chr23:22957047-22957222 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 411-588 |
| Cow position: | chr23:5446513-5446336 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 411-588 |
| Cow position: | chr23:21244789-21244966 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 411-588 |
| Cow position: | chr23:21267650-21267827 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 411-588 |
| Cow position: | chr23:22907855-22908029 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 411-588 |
| Cow position: | chr23:22934740-22934917 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 419-588 |
| Cow position: | chr23:5463568-5463399 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.