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Cow genome map

           
Conread name:
           
Ss1.1-Mixc-0040,a10.5
        

               
Conread position:
               
478-1188
               

               
Cow position:
               
chr27:790827-791544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
719
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
541, 594
               

               
Conread position:
               
929-1120
               

               
Cow position:
               
chr27:26249700-26249898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 23
               

               
Conread position:
               
932-1162
               

               
Cow position:
               
chr27:12097993-12098234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 25
               

               
Conread position:
               
936-1178
               

               
Cow position:
               
chr27:15100405-15100151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
938-1153
               

               
Cow position:
               
chr27:5861612-5861839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
938-1162
               

               
Cow position:
               
chr27:22559485-22559718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
938-1178
               

               
Cow position:
               
chr27:22244580-22244341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
938-1188
               

               
Cow position:
               
chr27:2001608-2001347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
45, 19
               

               
Conread position:
               
938-1188
               

               
Cow position:
               
chr27:3340163-3340424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
938-1188
               

               
Cow position:
               
chr27:5853509-5853249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
938-1188
               

               
Cow position:
               
chr27:11481694-11481433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
938-1188
               

               
Cow position:
               
chr27:13198311-13198568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
938-1188
               

               
Cow position:
               
chr27:15033128-15033389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
938-1188
               

               
Cow position:
               
chr27:19487220-19487482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
938-1188
               

               
Cow position:
               
chr27:25800447-25800709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
48, 27
               

               
Conread position:
               
938-1188
               

               
Cow position:
               
chr27:29812065-29811806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 19
               

               
Conread position:
               
939-1138
               

               
Cow position:
               
chr27:7958428-7958220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1143
               

               
Cow position:
               
chr27:1654862-1654646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1143
               

               
Cow position:
               
chr27:23079849-23079633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1156
               

               
Cow position:
               
chr27:17403304-17403533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1163
               

               
Cow position:
               
chr27:24260074-24260306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
939-1171
               

               
Cow position:
               
chr27:707360-707606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1172
               

               
Cow position:
               
chr27:27064037-27063804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
939-1173
               

               
Cow position:
               
chr27:12005918-12006164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1176
               

               
Cow position:
               
chr27:16260558-16260323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
939-1176
               

               
Cow position:
               
chr27:26545517-26545269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:165159-165408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
35, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:1030791-1031042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:1354005-1354254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:1636543-1636293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
44, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:3652937-3653188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:4769083-4768832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:5836583-5836333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:8187581-8187344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:8743340-8743584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:10306865-10306618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:10579706-10579455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:11095046-11095297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:12277869-12277620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
56, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:13354068-13353818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:13409759-13409507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:13901886-13901635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:15312606-15312857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:16030635-16030885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:16045493-16045241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:17476460-17476703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:19299803-19300054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:20001053-20001304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:20811179-20810928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1178
               

               
Cow position:
               
chr27:25112928-25112678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
939-1179
               

               
Cow position:
               
chr27:5928213-5927964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 139
               

               
Conread position:
               
939-1179
               

               
Cow position:
               
chr27:29446342-29446594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1181
               

               
Cow position:
               
chr27:15315896-15316157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1183
               

               
Cow position:
               
chr27:8942283-8942031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
48, 18
               

               
Conread position:
               
939-1184
               

               
Cow position:
               
chr27:15509019-15508759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
939-1186
               

               
Cow position:
               
chr27:14381199-14380938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
939-1186
               

               
Cow position:
               
chr27:28984529-28984269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1187
               

               
Cow position:
               
chr27:15272314-15272571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1187
               

               
Cow position:
               
chr27:23074362-23074622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1187
               

               
Cow position:
               
chr27:24115864-24115600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
939-1187
               

               
Cow position:
               
chr27:26598283-26598544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:523784-523522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:526672-526413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:724307-724046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:1294010-1293749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:1481656-1481395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:1521442-1521176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:2332263-2332005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:2557231-2557492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:3231777-3232036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:3650244-3649983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:5914696-5914438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:8201699-8201438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:8202238-8202498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:8430013-8429755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:8959254-8959515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:8973208-8972947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:9333430-9333169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
47, 16
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:9989118-9989377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:11470293-11470034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:11606123-11606384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:11651859-11651598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:12006911-12006650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:12147655-12147394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:13422401-13422662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:14297952-14297709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:15178621-15178882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:15349397-15349141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:15871569-15871830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:16787241-16787498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:18741142-18740886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:19522947-19523208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:21350607-21350349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:21452207-21451948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:22796896-22797157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:23894097-23893836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:24295497-24295758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:26330690-26330434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:26644491-26644753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:26785574-26785317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:26856803-26856542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:27292156-27291895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:29035619-29035880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:29374143-29374404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
939-1188
               

               
Cow position:
               
chr27:30306514-30306764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
940-1150
               

               
Cow position:
               
chr27:525568-525783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1155
               

               
Cow position:
               
chr27:29493153-29492928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
940-1166
               

               
Cow position:
               
chr27:1502255-1502018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1167
               

               
Cow position:
               
chr27:9371914-9372153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1169
               

               
Cow position:
               
chr27:4508991-4509233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1169
               

               
Cow position:
               
chr27:4719487-4719252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1178
               

               
Cow position:
               
chr27:16117403-16117649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
43, 17
               

               
Conread position:
               
940-1178
               

               
Cow position:
               
chr27:21283490-21283735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1178
               

               
Cow position:
               
chr27:30446635-30446885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1178
               

               
Cow position:
               
chr27:30447596-30447852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
940-1179
               

               
Cow position:
               
chr27:8296918-8297165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
940-1181
               

               
Cow position:
               
chr27:4829268-4829018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
940-1183
               

               
Cow position:
               
chr27:8320287-8320048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1183
               

               
Cow position:
               
chr27:12173698-12173443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
940-1183
               

               
Cow position:
               
chr27:13696098-13695843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1183
               

               
Cow position:
               
chr27:16550871-16551122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
940-1183
               

               
Cow position:
               
chr27:19962889-19963135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
940-1183
               

               
Cow position:
               
chr27:31268968-31268721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 17
               

               
Conread position:
               
940-1187
               

               
Cow position:
               
chr27:9262517-9262775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 16
               

               
Conread position:
               
940-1187
               

               
Cow position:
               
chr27:12489642-12489891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
940-1187
               

               
Cow position:
               
chr27:16428416-16428161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1187
               

               
Cow position:
               
chr27:21986294-21986561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:536866-537126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
46, 16
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:1884631-1884891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:3729899-3729642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
45, 14
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:5423972-5423717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
36, 17
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:7418463-7418213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:7818708-7818967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:8335194-8335449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 26
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:14669971-14669706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:18954797-18954544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
46, 21
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:19388435-19388688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:19931796-19932055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:20866114-20865862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:23481441-23481704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:25885560-25885301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:26653719-26653963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:27527798-27527539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:30677328-30677587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
940-1188
               

               
Cow position:
               
chr27:30776961-30777217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 17
               

               
Conread position:
               
941-1178
               

               
Cow position:
               
chr27:12549519-12549768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
941-1179
               

               
Cow position:
               
chr27:12112300-12112052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
941-1188
               

               
Cow position:
               
chr27:12751290-12751033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 16
               

               
Conread position:
               
942-1179
               

               
Cow position:
               
chr27:1141457-1141207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
942-1183
               

               
Cow position:
               
chr27:17049686-17049943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
42, 19
               

               
Conread position:
               
942-1187
               

               
Cow position:
               
chr27:4664888-4665145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
942-1188
               

               
Cow position:
               
chr27:10384191-10383932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
44, 15
               

               
Conread position:
               
942-1188
               

               
Cow position:
               
chr27:17923668-17923410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 15
               

               
Conread position:
               
943-1179
               

               
Cow position:
               
chr27:27683620-27683374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
943-1183
               

               
Cow position:
               
chr27:15645244-15644990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
43, 14
               

               
Conread position:
               
947-1173
               

               
Cow position:
               
chr27:584180-584421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
39, 19
               

               
Conread position:
               
948-1183
               

               
Cow position:
               
chr27:12282430-12282194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
948-1183
               

               
Cow position:
               
chr27:21246827-21247068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
37, 9
               

               
Conread position:
               
948-1188
               

               
Cow position:
               
chr27:20828286-20828034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
952-1178
               

               
Cow position:
               
chr27:26033778-26034010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
954-1188
               

               
Cow position:
               
chr27:4979325-4979088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 131
               

               
Conread position:
               
954-1188
               

               
Cow position:
               
chr27:25784013-25784262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
9, 126
               

               
Conread position:
               
956-1188
               

               
Cow position:
               
chr27:22330235-22329993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
30, 120
               

               
Conread position:
               
957-1177
               

               
Cow position:
               
chr27:28235631-28235866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
957-1179
               

               
Cow position:
               
chr27:8291589-8291360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 104
               

               
Conread position:
               
957-1186
               

               
Cow position:
               
chr27:11326235-11326470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
957-1187
               

               
Cow position:
               
chr27:11954831-11954596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 20
               

               
Conread position:
               
957-1188
               

               
Cow position:
               
chr27:12191018-12190776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 56
               

               
Conread position:
               
957-1188
               

               
Cow position:
               
chr27:12554804-12555043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
25, 231
               

               
Conread position:
               
957-1188
               

               
Cow position:
               
chr27:29046325-29046079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
958-1173
               

               
Cow position:
               
chr27:5269083-5268864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 19
               

               
Conread position:
               
958-1178
               

               
Cow position:
               
chr27:27501925-27501698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
958-1183
               

               
Cow position:
               
chr27:28924623-28924386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
958-1188
               

               
Cow position:
               
chr27:18943639-18943393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
28, 188
               

               
Conread position:
               
960-1173
               

               
Cow position:
               
chr27:28008638-28008413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 22
               

               
Conread position:
               
960-1188
               

               
Cow position:
               
chr27:13182546-13182788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
961-1187
               

               
Cow position:
               
chr27:344191-344427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
25, 114
               

               
Conread position:
               
965-1187
               

               
Cow position:
               
chr27:9254409-9254639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
19, 169
               

               
Conread position:
               
965-1188
               

               
Cow position:
               
chr27:21203320-21203551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 123
               

               
Conread position:
               
966-1178
               

               
Cow position:
               
chr27:28907499-28907721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 112
               

               
Conread position:
               
976-1188
               

               
Cow position:
               
chr27:30176793-30177011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
43, 7
               

               
Conread position:
               
976-1188
               

               
Cow position:
               
chr27:30476529-30476747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
45, 7
               

               
Conread position:
               
978-1183
               

               
Cow position:
               
chr27:10283851-10283640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
979-1157
               

               
Cow position:
               
chr27:23793929-23794105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
51, 72
               

               
Conread position:
               
979-1186
               

               
Cow position:
               
chr27:6335597-6335809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
41, 164
               

               
Conread position:
               
983-1187
               

               
Cow position:
               
chr27:7748720-7748513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
38, 89
               

               
Conread position:
               
983-1188
               

               
Cow position:
               
chr27:16075996-16076206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
38, 146
               

               
Conread position:
               
984-1188
               

               
Cow position:
               
chr27:28146003-28145806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
985-1188
               

               
Cow position:
               
chr27:2936539-2936326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
35, 181
               

               
Conread position:
               
992-1183
               

               
Cow position:
               
chr27:8727295-8727099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 158
               

               
Conread position:
               
993-1178
               

               
Cow position:
               
chr27:1145434-1145241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
27, 90
               

               
Conread position:
               
994-1183
               

               
Cow position:
               
chr27:10321761-10321569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
996-1187
               

               
Cow position:
               
chr27:19626807-19626613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
998-1179
               

               
Cow position:
               
chr27:1081478-1081665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
21, 74
               

               
Conread position:
               
998-1183
               

               
Cow position:
               
chr27:27234455-27234644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
999-1187
               

               
Cow position:
               
chr27:23233687-23233493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1008-1179
               

               
Cow position:
               
chr27:16581488-16581664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
12, 130
               

               
Conread position:
               
1021-1188
               

               
Cow position:
               
chr27:24066044-24065876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
1022-1173
               

               
Cow position:
               
chr27:15292600-15292747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1027-1187
               

               
Cow position:
               
chr27:11291154-11290992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1027-1188
               

               
Cow position:
               
chr27:11434826-11434665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
8, 39
               

               
Conread position:
               
1029-1188
               

               
Cow position:
               
chr27:17423272-17423114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 5
               

               
Conread position:
               
1038-1188
               

               
Cow position:
               
chr27:11256035-11256185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
1039-1178
               

               
Cow position:
               
chr27:8427509-8427370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1039-1178
               

               
Cow position:
               
chr27:24055334-24055194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
1039-1183
               

               
Cow position:
               
chr27:16110804-16110661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1039-1183
               

               
Cow position:
               
chr27:22013873-22013730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1039-1187
               

               
Cow position:
               
chr27:25472084-25472232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 26
               

               
Conread position:
               
1039-1188
               

               
Cow position:
               
chr27:18970379-18970233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
1040-1187
               

               
Cow position:
               
chr27:17864627-17864481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
101, 71
               

               
Conread position:
               
1040-1188
               

               
Cow position:
               
chr27:4331089-4331237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1040-1188
               

               
Cow position:
               
chr27:6074648-6074797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
1040-1188
               

               
Cow position:
               
chr27:11490270-11490123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
1042-1187
               

               
Cow position:
               
chr27:31546901-31547047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
1048-1176
               

               
Cow position:
               
chr27:16836744-16836871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
1064-1181
               

               
Cow position:
               
chr27:8587108-8586992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
1065-1178
               

               
Cow position:
               
chr27:4982985-4982872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1066-1178
               

               
Cow position:
               
chr27:5106805-5106693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1082-1188
               

               
Cow position:
               
chr27:24570832-24570938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.