Cow genome map


           Conread name:
           Ss1.1-Mixc-0041,j01.5
        

               Conread position:
               1133-1295
               

               Cow position:
               chr15:10828983-10829142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               24, 36
               

               Conread position:
               1133-1296
               

               Cow position:
               chr15:545370-545530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               38, 50
               

               Conread position:
               1135-1294
               

               Cow position:
               chr15:26066549-26066707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               34, 48
               

               Conread position:
               1135-1295
               

               Cow position:
               chr15:47443666-47443825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               34, 48
               

               Conread position:
               1138-1294
               

               Cow position:
               chr15:11648975-11649129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               1151-1295
               

               Cow position:
               chr15:27108688-27108829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               1151-1295
               

               Cow position:
               chr15:28716013-28715869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 33
               
Show alignments to all cow chromosomes.