Cow genome map


           Conread name:
           Ss1.1-Mixc-0041,j01.5
        

               Conread position:
               1100-1295
               

               Cow position:
               chr8:24209632-24209435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               25, 87
               

               Conread position:
               1124-1293
               

               Cow position:
               chr8:51500629-51500796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               1133-1290
               

               Cow position:
               chr8:38070876-38071032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               41, 56
               

               Conread position:
               1133-1294
               

               Cow position:
               chr8:18899649-18899489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               1133-1295
               

               Cow position:
               chr8:41210105-41210265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               1133-1295
               

               Cow position:
               chr8:42871719-42871556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               16, 51
               

               Conread position:
               1135-1294
               

               Cow position:
               chr8:24788311-24788467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               47, 0
               
Show alignments to all cow chromosomes.