Cow genome map
| Conread name: | Ss1.1-Mixc-0041,o07.5 |
| Conread position: | 79-623 |
| Cow position: | chr10:8996558-8996000 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 91-636 |
| Cow position: | chr10:8996630-8996071 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 98-643 |
| Cow position: | chr10:9031554-9032096 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 266, 59 |
| Conread position: | 135-642 |
| Cow position: | chr10:8996661-8996150 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 506 |
| Conread position: | 164-636 |
| Cow position: | chr10:8996881-8996407 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 19 |
| Conread position: | 177-633 |
| Cow position: | chr10:9010344-9009886 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 5 |
| Conread position: | 182-636 |
| Cow position: | chr10:8996780-8996323 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 188-636 |
| Cow position: | chr10:9010585-9010135 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 149 |
| Conread position: | 192-532 |
| Cow position: | chr10:9031324-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 192-626 |
| Cow position: | chr10:9010497-9010065 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 394, 398 |
| Conread position: | 192-636 |
| Cow position: | chr10:21939085-21938642 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 424, 336 |
| Conread position: | 195-602 |
| Cow position: | chr10:9010242-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 208 |
| Conread position: | 195-609 |
| Cow position: | chr10:9031728-9032141 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 270 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 120 |
| Conread position: | 196-575 |
| Cow position: | chr10:21939319-21938954 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 19, 10 |
| Conread position: | 196-625 |
| Cow position: | chr10:8996681-8996251 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 15 |
| Conread position: | 196-628 |
| Cow position: | chr10:9010409-9009977 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 196-636 |
| Cow position: | chr10:8996933-8996491 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 16 |
| Conread position: | 211-453 |
| Cow position: | chr10:9010058-9009816 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 214-565 |
| Cow position: | chr10:9031262-9031613 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 218-638 |
| Cow position: | chr10:9031182-9031604 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 407, 0 |
| Conread position: | 223-633 |
| Cow position: | chr10:21939222-21938810 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 392, 0 |
| Conread position: | 224-633 |
| Cow position: | chr10:21939137-21938728 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 264 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 106, 86 |
| Conread position: | 266-636 |
| Cow position: | chr10:9010591-9010219 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 358, 0 |
Show alignments to all cow chromosomes.