Cow genome map


           Conread name:
           Ss1.1-Mixc-0041,j01.5
        

               Conread position:
               1100-1295
               

               Cow position:
               chr11:1886055-1886254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 88
               

               Conread position:
               1125-1296
               

               Cow position:
               chr11:58397765-58397596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               44, 58
               

               Conread position:
               1140-1294
               

               Cow position:
               chr11:24655695-24655543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               23, 43
               

               Conread position:
               1141-1296
               

               Cow position:
               chr11:12160844-12160692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               29, 41
               

               Conread position:
               1150-1294
               

               Cow position:
               chr11:20410323-20410179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 33
               

               Conread position:
               1151-1293
               

               Cow position:
               chr11:20590575-20590437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               1167-1291
               

               Cow position:
               chr11:47644527-47644649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               120, 15
               
Show alignments to all cow chromosomes.