Cow genome map


           Conread name:
           Ss1.1-Mixc-0041,j01.5
        

               Conread position:
               1098-1285
               

               Cow position:
               chr13:55458692-55458877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               71, 85
               

               Conread position:
               1100-1293
               

               Cow position:
               chr13:21279173-21279373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               33, 98
               

               Conread position:
               1100-1296
               

               Cow position:
               chr13:15788335-15788529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 30
               

               Conread position:
               1101-1296
               

               Cow position:
               chr13:12508276-12508084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               57, 16
               

               Conread position:
               1102-1291
               

               Cow position:
               chr13:35694093-35694281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               1133-1292
               

               Cow position:
               chr13:56901941-56901784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               36, 51
               

               Conread position:
               1133-1294
               

               Cow position:
               chr13:6187567-6187409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               1133-1295
               

               Cow position:
               chr13:29726412-29726252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               38, 13
               

               Conread position:
               1140-1291
               

               Cow position:
               chr13:21292645-21292498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               29, 43
               

               Conread position:
               1150-1296
               

               Cow position:
               chr13:47571601-47571745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 33
               

               Conread position:
               1157-1296
               

               Cow position:
               chr13:32201739-32201874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               29, 0
               
Show alignments to all cow chromosomes.