Cow genome map


           Conread name:
           Ss1.1-Mixc-0041,j01.5
        

               Conread position:
               1101-1296
               

               Cow position:
               chr14:4527150-4527349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               29, 88
               

               Conread position:
               1126-1295
               

               Cow position:
               chr14:26590975-26590809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 57
               

               Conread position:
               1133-1294
               

               Cow position:
               chr14:36792323-36792166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 17
               

               Conread position:
               1151-1295
               

               Cow position:
               chr14:38014045-38014187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               1151-1296
               

               Cow position:
               chr14:2849862-2850005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               1152-1295
               

               Cow position:
               chr14:38999836-38999976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               17, 31
               
Show alignments to all cow chromosomes.