Cow genome map


           Conread name:
           Ss1.1-Mixc-0041,j01.5
        

               Conread position:
               1061-1293
               

               Cow position:
               chr18:13354331-13354098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               68, 27
               

               Conread position:
               1076-1295
               

               Cow position:
               chr18:27519643-27519866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               15, 112
               

               Conread position:
               1099-1295
               

               Cow position:
               chr18:42562640-42562451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               70, 10
               

               Conread position:
               1101-1295
               

               Cow position:
               chr18:9139673-9139482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               68, 55
               

               Conread position:
               1126-1295
               

               Cow position:
               chr18:23724669-23724502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               45, 57
               

               Conread position:
               1133-1295
               

               Cow position:
               chr18:19305003-19304841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               31, 52
               

               Conread position:
               1133-1296
               

               Cow position:
               chr18:36882524-36882688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               1136-1293
               

               Cow position:
               chr18:24459980-24460135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 46
               

               Conread position:
               1151-1295
               

               Cow position:
               chr18:26319126-26319267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               18, 32
               
Show alignments to all cow chromosomes.