Cow genome map
| Conread name: | Ss1.1-Mixc-0041,j01.5 |
| Conread position: | 2-121 |
| Cow position: | chr5:69550850-69550969 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 120-354 |
| Cow position: | chr5:69510797-69511034 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 183, 225 |
| Conread position: | 120-380 |
| Cow position: | chr5:69551882-69552142 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 388-501 |
| Cow position: | chr5:69552398-69552511 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 880-1052 |
| Cow position: | chr5:69559400-69559570 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1092-1293 |
| Cow position: | chr5:10042618-10042821 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 97 |
| Conread position: | 1100-1277 |
| Cow position: | chr5:39437292-39437473 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 88 |
| Conread position: | 1101-1295 |
| Cow position: | chr5:15835193-15834996 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 91 |
| Conread position: | 1133-1293 |
| Cow position: | chr5:33060622-33060468 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 1135-1294 |
| Cow position: | chr5:47758382-47758539 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 49 |
| Conread position: | 1135-1295 |
| Cow position: | chr5:2179558-2179716 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 48 |
| Conread position: | 1135-1295 |
| Cow position: | chr5:24609615-24609456 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 54 |
| Conread position: | 1151-1295 |
| Cow position: | chr5:53629528-53629670 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 1157-1295 |
| Cow position: | chr5:47384115-47383980 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 1158-1295 |
| Cow position: | chr5:28860250-28860384 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 61, 9 |
Show alignments to all cow chromosomes.