Cow genome map
| Conread name: | Ss1.1-Mixc-0041,o07.5 |
| Conread position: | 44-596 |
| Cow position: | chr24:17078008-17077446 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 150 |
| Conread position: | 71-634 |
| Cow position: | chr24:17036014-17035437 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 74-625 |
| Cow position: | chr24:17035591-17035027 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 120 |
| Conread position: | 74-628 |
| Cow position: | chr24:17035928-17035361 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 121 |
| Conread position: | 74-636 |
| Cow position: | chr24:17036431-17035855 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 120 |
| Conread position: | 78-551 |
| Cow position: | chr24:17035419-17034935 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 116 |
| Conread position: | 87-633 |
| Cow position: | chr24:17036166-17035606 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 107 |
| Conread position: | 91-623 |
| Cow position: | chr24:17036330-17035786 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 103 |
| Conread position: | 155-625 |
| Cow position: | chr24:17035665-17035195 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 5 |
| Conread position: | 158-340 |
| Cow position: | chr24:16986473-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 158-633 |
| Cow position: | chr24:17070502-17070979 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 158-636 |
| Cow position: | chr24:17035999-17035519 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 31 |
| Conread position: | 159-463 |
| Cow position: | chr24:17070755-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 212 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 236, 243 |
| Conread position: | 159-636 |
| Cow position: | chr24:17070419-17070898 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 456, 0 |
| Conread position: | 159-636 |
| Cow position: | chr24:17078217-17077738 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 456, 0 |
| Conread position: | 164-634 |
| Cow position: | chr24:17035573-17035101 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 461, 0 |
| Conread position: | 164-636 |
| Cow position: | chr24:17035741-17035267 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 435, 430 |
| Conread position: | 170-634 |
| Cow position: | chr24:17036155-17035689 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 442, 0 |
| Conread position: | 192-477 |
| Cow position: | chr24:17013241-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 262, 0 |
| Conread position: | 192-547 |
| Cow position: | chr24:17070704-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 119 |
| Conread position: | 192-611 |
| Cow position: | chr24:17078016-17077597 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 192-613 |
| Cow position: | chr24:17077932-17077511 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 192-633 |
| Cow position: | chr24:17036552-17036110 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 379, 7 |
| Conread position: | 192-634 |
| Cow position: | chr24:17035377-17034934 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 124 |
| Conread position: | 193-636 |
| Cow position: | chr24:17070621-17071064 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 193-636 |
| Cow position: | chr24:17078099-17077654 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 405, 401 |
| Conread position: | 195-636 |
| Cow position: | chr24:17036466-17036023 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 0 |
| Conread position: | 197-557 |
| Cow position: | chr24:17013162-17013521 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 137 |
| Conread position: | 202-424 |
| Cow position: | chr24:16986432-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 7, 110 |
| Conread position: | 214-635 |
| Cow position: | chr24:17070390-17070813 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 266-634 |
| Cow position: | chr24:17013147-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 152 |
| Conread position: | 295-634 |
| Cow position: | chr24:17070387-17070728 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 0 |
| Conread position: | 298-508 |
| Cow position: | chr24:16986445-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 346-634 |
| Cow position: | chr24:17070353-17070644 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 388-584 |
| Cow position: | chr24:16986451-16986647 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.