Cow genome map

Conread name: Ss1.1-Mixc-0041,o07.5

Conread position: 139-633
Cow position: chr6:49340677-49341176 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 175

Conread position: 139-636
Cow position: chr6:49340761-49341263 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 159-620
Cow position: chr6:49428944-49429405 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 280
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 29, 14

Conread position: 159-637
Cow position: chr6:49396253-49396733 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 23

Conread position: 170-634
Cow position: chr6:49396101-49396562 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 69

Conread position: 173-636
Cow position: chr6:49340380-49340843 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 452, 10

Conread position: 192-397
Cow position: chr6:49396790-49396995 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 137
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 192-634
Cow position: chr6:49396454-49396898 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 280
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 400, 406

Conread position: 192-636
Cow position: chr6:49340985-49341431 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 423, 0

Conread position: 195-636
Cow position: chr6:49340568-49341011 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 8

Conread position: 195-636
Cow position: chr6:49340652-49341095 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 216

Conread position: 196-625
Cow position: chr6:49428897-49429327 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 257
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 211, 203

Conread position: 196-631
Cow position: chr6:49428729-49429165 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 263
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 152, 141

Conread position: 196-636
Cow position: chr6:49340485-49340927 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 419, 0

Conread position: 196-636
Cow position: chr6:49340905-49341347 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 416, 0

Conread position: 196-638
Cow position: chr6:49396374-49396818 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 40

Conread position: 197-638
Cow position: chr6:49396543-49396986 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 272
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 425, 0

Conread position: 199-613
Cow position: chr6:49395879-49396287 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 258
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 348, 0

Conread position: 199-636
Cow position: chr6:49340083-49340507 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 275
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 416, 34

Conread position: 212-611
Cow position: chr6:49362436-49362823 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 262
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 26

Conread position: 216-611
Cow position: chr6:49340265-49340648 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 0

Conread position: 223-634
Cow position: chr6:49396233-49396646 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 181

Conread position: 262-564
Cow position: chr6:49362642-49362948 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 195
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 134, 143

Conread position: 262-621
Cow position: chr6:49429131-49429492 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 224
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 351, 0

Show alignments to all cow chromosomes.