Cow genome map
| Conread name: | Ss1.1-Mixc-0043,c06.5 |
| Conread position: | 2-135 |
| Cow position: | chr18:1566507-1566640 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 22-135 |
| Cow position: | chr18:5866181-5866294 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-135 |
| Cow position: | chr18:5870218-5870329 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 95-214 |
| Cow position: | chr18:1566711-1566830 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 30 |
| Conread position: | 110-214 |
| Cow position: | chr18:5866389-5866492 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 132-213 |
| Cow position: | chr18:5870412-5870493 (view UCSC Genome Browser custom track) |
| Alignm length: | 82 |
| Alignm identity: | 73 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-473 |
| Cow position: | chr18:5867450-5867631 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 147 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-474 |
| Cow position: | chr18:1567268-1567450 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 292-474 |
| Cow position: | chr18:5870892-5871074 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 474-609 |
| Cow position: | chr18:1568345-1568480 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 123 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 474-609 |
| Cow position: | chr18:5872060-5872195 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 479-609 |
| Cow position: | chr18:5867714-5867844 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 594-789 |
| Cow position: | chr18:5872638-5872832 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 594-814 |
| Cow position: | chr18:1568861-1569079 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 600-773 |
| Cow position: | chr18:5868435-5868607 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
Show alignments to all cow chromosomes.