Cow genome map


           Conread name:
           Ss1.1-Mixc-0044,b23.5
        

               Conread position:
               5-162
               

               Cow position:
               chr12:5405124-5405284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               164-291
               

               Cow position:
               chr12:5412239-5412365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               118
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               268-400
               

               Cow position:
               chr12:5413580-5413709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               398-505
               

               Cow position:
               chr12:5417066-5417173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               504-641
               

               Cow position:
               chr12:5420837-5420974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               121
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               638-809
               

               Cow position:
               chr12:5421883-5422054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               156
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               905-1131
               

               Cow position:
               chr12:5988545-5988319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.