Cow genome map

Conread name: Ss1.1-Mixg-0010f06.5

Conread position: 1-515
Cow position: chr14:447703-448217 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 311
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 107, 128

Conread position: 1-592
Cow position: chr14:25876432-25877024 (view UCSC Genome Browser custom track)
Alignm length: 596
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 283

Conread position: 1-598
Cow position: chr14:3080816-3080219 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 358
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 107, 126

Conread position: 1-598
Cow position: chr14:25794985-25794387 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 36

Conread position: 1-598
Cow position: chr14:25836581-25837178 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 366, 379

Conread position: 1-599
Cow position: chr14:25784045-25784644 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 23

Conread position: 1-599
Cow position: chr14:25784381-25784967 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 381
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 14, 23

Conread position: 1-649
Cow position: chr14:25859466-25860114 (view UCSC Genome Browser custom track)
Alignm length: 655
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 39

Conread position: 1-667
Cow position: chr14:25876517-25877186 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 39

Conread position: 1-741
Cow position: chr14:25795321-25794573 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 22

Conread position: 1-742
Cow position: chr14:25836161-25836909 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 126

Conread position: 1-743
Cow position: chr14:25836413-25837163 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 594, 610

Conread position: 1-745
Cow position: chr14:25794901-25794149 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 120

Conread position: 1-746
Cow position: chr14:25783626-25784378 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 22

Conread position: 1-749
Cow position: chr14:25783794-25784548 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 22

Conread position: 3-598
Cow position: chr14:25836247-25836842 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 37

Conread position: 3-656
Cow position: chr14:25876939-25877594 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 195

Conread position: 3-667
Cow position: chr14:25876351-25877018 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 50

Conread position: 23-746
Cow position: chr14:25783312-25784042 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 341, 336

Conread position: 24-598
Cow position: chr14:3101366-3100798 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 348
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 418, 34

Conread position: 26-742
Cow position: chr14:25783567-25784290 (view UCSC Genome Browser custom track)
Alignm length: 731
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 81

Conread position: 26-746
Cow position: chr14:25795127-25794400 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 95

Conread position: 27-562
Cow position: chr14:25836691-25837226 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 13

Conread position: 27-578
Cow position: chr14:25877299-25877850 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 13

Conread position: 27-592
Cow position: chr14:25860248-25860808 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 13

Conread position: 28-667
Cow position: chr14:25836524-25837166 (view UCSC Genome Browser custom track)
Alignm length: 647
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 238, 245

Conread position: 35-598
Cow position: chr14:25783996-25784559 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 72

Conread position: 35-746
Cow position: chr14:25784164-25784876 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 72

Conread position: 35-747
Cow position: chr14:25783912-25784631 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 73

Conread position: 36-653
Cow position: chr14:25836364-25836983 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 484, 502

Conread position: 36-746
Cow position: chr14:25783493-25784210 (view UCSC Genome Browser custom track)
Alignm length: 720
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 343

Conread position: 36-746
Cow position: chr14:25795453-25794736 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 145

Conread position: 37-746
Cow position: chr14:25795368-25794652 (view UCSC Genome Browser custom track)
Alignm length: 727
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 75

Conread position: 41-670
Cow position: chr14:3156052-3156675 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 378
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 586, 438

Conread position: 42-439
Cow position: chr14:25877481-25877879 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 252
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 10, 80

Conread position: 42-594
Cow position: chr14:25910738-25911285 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 348
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 68, 53

Conread position: 44-436
Cow position: chr14:3127697-3127305 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 235
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 47-592
Cow position: chr14:680299-680844 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 323
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 53, 76

Conread position: 47-598
Cow position: chr14:447665-448216 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 340
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 54, 73

Conread position: 48-449
Cow position: chr14:25896031-25896430 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 246
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 73

Conread position: 48-517
Cow position: chr14:25877404-25877873 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 291
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 168, 135

Conread position: 48-561
Cow position: chr14:3155975-3156488 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 312
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 482, 493

Conread position: 48-598
Cow position: chr14:25895191-25895741 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 326
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 60

Conread position: 48-600
Cow position: chr14:25895527-25896079 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 332
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 53, 73

Conread position: 48-646
Cow position: chr14:25860185-25860783 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 365
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 163, 143

Conread position: 48-657
Cow position: chr14:25877236-25877847 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 310

Conread position: 51-598
Cow position: chr14:3101007-3100462 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 64

Conread position: 55-481
Cow position: chr14:3155409-3155835 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 266
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 43, 49

Conread position: 55-515
Cow position: chr14:3127770-3127310 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 291
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 227, 240

Conread position: 55-517
Cow position: chr14:3080174-3079712 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 288
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 227, 240

Conread position: 55-598
Cow position: chr14:25876823-25877366 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 63

Conread position: 55-598
Cow position: chr14:25895702-25896245 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 339
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 52, 62

Conread position: 55-599
Cow position: chr14:680475-681019 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 335
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 79, 74

Conread position: 55-656
Cow position: chr14:25859940-25860543 (view UCSC Genome Browser custom track)
Alignm length: 611
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 44

Conread position: 55-663
Cow position: chr14:25859268-25859879 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 143

Conread position: 55-667
Cow position: chr14:25859352-25859967 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 381, 372

Conread position: 55-670
Cow position: chr14:25859772-25860390 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 152

Conread position: 55-738
Cow position: chr14:25835795-25836485 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 425
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 98, 87

Conread position: 55-739
Cow position: chr14:25835963-25836654 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 464, 485

Conread position: 55-743
Cow position: chr14:25860024-25860719 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 146

Conread position: 56-598
Cow position: chr14:25895115-25895657 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 322
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 50, 60

Conread position: 57-426
Cow position: chr14:680897-681266 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 236
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 49

Conread position: 57-486
Cow position: chr14:3080088-3079657 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 270
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 77, 72

Conread position: 57-515
Cow position: chr14:3127936-3127478 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 292
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 77, 72

Conread position: 57-518
Cow position: chr14:3100835-3100374 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 285
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 80, 52

Conread position: 57-519
Cow position: chr14:25910833-25911295 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 288
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 50, 64

Conread position: 57-598
Cow position: chr14:3080256-3079715 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 327
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 64, 58

Conread position: 57-598
Cow position: chr14:3080340-3079799 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 327
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 462, 484

Conread position: 57-598
Cow position: chr14:3080592-3080051 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 235

Conread position: 57-598
Cow position: chr14:3155900-3156441 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 336
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 60, 76

Conread position: 57-598
Cow position: chr14:25895452-25895993 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 326
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 310, 321

Conread position: 57-661
Cow position: chr14:25895872-25896473 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 356
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 54, 64

Conread position: 57-746
Cow position: chr14:25836049-25836745 (view UCSC Genome Browser custom track)
Alignm length: 700
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 412, 403

Conread position: 58-739
Cow position: chr14:25836134-25836822 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 462, 480

Conread position: 58-741
Cow position: chr14:25859187-25859877 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 419
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 63, 57

Conread position: 69-598
Cow position: chr14:680657-681186 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 60

Conread position: 72-598
Cow position: chr14:3080913-3080387 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 326
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 42, 81

Conread position: 120-592
Cow position: chr14:25894846-25895315 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 282
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 32

Conread position: 120-598
Cow position: chr14:3127957-3127479 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 9

Conread position: 124-598
Cow position: chr14:447488-447964 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 294
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 23, 166

Conread position: 126-649
Cow position: chr14:25835698-25836221 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 308
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 82

Conread position: 128-667
Cow position: chr14:25910740-25911276 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 334
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 475, 50

Conread position: 131-598
Cow position: chr14:447581-448048 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 294
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 153, 157

Conread position: 131-643
Cow position: chr14:680803-681313 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 170

Conread position: 132-515
Cow position: chr14:433971-434354 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 231
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 316, 332

Conread position: 132-588
Cow position: chr14:25895359-25895815 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 280
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 168, 161

Conread position: 132-598
Cow position: chr14:433887-434353 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 269
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 132-598
Cow position: chr14:680468-680934 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 289
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 152, 187

Conread position: 132-598
Cow position: chr14:3061580-3061114 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 289
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 72

Conread position: 136-517
Cow position: chr14:3155406-3155787 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 244
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 223, 228

Conread position: 146-598
Cow position: chr14:3155905-3156357 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 373, 380

Conread position: 150-435
Cow position: chr14:447936-448221 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 177
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 165-599
Cow position: chr14:3128164-3127730 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 270
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 25, 18

Conread position: 212-657
Cow position: chr14:25859173-25859620 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 280
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 319, 337

Conread position: 215-649
Cow position: chr14:25876227-25876661 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 268
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 72, 56

Conread position: 220-598
Cow position: chr14:3061744-3061366 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 234
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 62, 75

Conread position: 222-598
Cow position: chr14:3155408-3155784 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 240
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 224-592
Cow position: chr14:25876320-25876688 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 229
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 172, 142

Conread position: 225-598
Cow position: chr14:3155900-3156273 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 246
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 294, 308

Conread position: 279-667
Cow position: chr14:25795462-25795071 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 257
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 167, 155

Conread position: 294-598
Cow position: chr14:3101432-3101129 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 192
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 0

Conread position: 308-599
Cow position: chr14:3155899-3156190 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 182
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 75

Conread position: 388-600
Cow position: chr14:3155406-3155618 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 132, 153

Show alignments to all cow chromosomes.