Cow genome map

Conread name: Ss1.1-Mixg-0010f06.5

Conread position: 1-576
Cow position: chr17:22499114-22498538 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 540

Conread position: 1-577
Cow position: chr17:22552066-22551490 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 349
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 381, 360

Conread position: 1-598
Cow position: chr17:22552150-22551553 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 55

Conread position: 1-598
Cow position: chr17:22552822-22552225 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 55

Conread position: 1-599
Cow position: chr17:22473364-22473963 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 560, 0

Conread position: 1-649
Cow position: chr17:22552906-22552258 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-671
Cow position: chr17:22590072-22589399 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 641, 0

Conread position: 3-411
Cow position: chr17:22498859-22498460 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 265
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 327, 0

Conread position: 3-566
Cow position: chr17:22589734-22589173 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 492, 497

Conread position: 3-598
Cow position: chr17:22552568-22551973 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 118

Conread position: 3-649
Cow position: chr17:22499363-22498717 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 126

Conread position: 3-667
Cow position: chr17:22473201-22473865 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 62

Conread position: 17-599
Cow position: chr17:22499263-22498683 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 33

Conread position: 22-598
Cow position: chr17:22552379-22551805 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 27

Conread position: 26-589
Cow position: chr17:22452326-22451763 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 64

Conread position: 27-598
Cow position: chr17:22552292-22551721 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-649
Cow position: chr17:22552628-22552006 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 27-741
Cow position: chr17:22552460-22551739 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 106

Conread position: 28-599
Cow position: chr17:22552963-22552392 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 261

Conread position: 35-598
Cow position: chr17:22452401-22451838 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 76

Conread position: 35-598
Cow position: chr17:22553040-22552477 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 35-600
Cow position: chr17:22590206-22589641 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 485, 506

Conread position: 36-507
Cow position: chr17:22452148-22451677 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 282
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 41-598
Cow position: chr17:22552194-22551637 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 41-657
Cow position: chr17:22499157-22498539 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 387

Conread position: 44-598
Cow position: chr17:22590281-22589727 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 44-670
Cow position: chr17:22473323-22473953 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 556, 0

Conread position: 55-598
Cow position: chr17:22590102-22589559 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 388, 374

Conread position: 55-651
Cow position: chr17:22589766-22589170 (view UCSC Genome Browser custom track)
Alignm length: 599
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 68

Conread position: 57-598
Cow position: chr17:22553102-22552561 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 76

Conread position: 57-773
Cow position: chr17:22499393-22498670 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 217

Conread position: 83-598
Cow position: chr17:22452522-22452006 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 0

Conread position: 132-493
Cow position: chr17:41440626-41440265 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 218
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 327, 333

Conread position: 152-599
Cow position: chr17:22590257-22589810 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 204-604
Cow position: chr17:22590289-22589888 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 175

Conread position: 222-599
Cow position: chr17:22553105-22552728 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 240
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 153, 157

Conread position: 294-598
Cow position: chr17:22553117-22552813 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 185
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 304-738
Cow position: chr17:22499398-22498957 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 344, 410

Show alignments to all cow chromosomes.