Cow genome map

Conread name: Ss1.1-Mixg-0010f06.5

Conread position: 1-402
Cow position:
Alignm length: 405
Alignm identity: 263
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 19, 11

Conread position: 1-404
Cow position:
Alignm length: 406
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 126

Conread position: 1-430
Cow position:
Alignm length: 432
Alignm identity: 265
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 98, 128

Conread position: 1-494
Cow position:
Alignm length: 496
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 136

Conread position: 1-592
Cow position:
Alignm length: 594
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 27

Conread position: 1-598
Cow position:
Alignm length: 601
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 433, 206

Conread position: 1-598
Cow position:
Alignm length: 600
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 181

Conread position: 1-598
Cow position:
Alignm length: 600
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 267

Conread position: 1-599
Cow position:
Alignm length: 599
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-599
Cow position:
Alignm length: 600
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 435, 427

Conread position: 1-599
Cow position:
Alignm length: 600
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 530, 540

Conread position: 1-600
Cow position:
Alignm length: 600
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 1-667
Cow position:
Alignm length: 670
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 641, 0

Conread position: 1-744
Cow position:
Alignm length: 756
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 424

Conread position: 1-746
Cow position:
Alignm length: 755
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 127

Conread position: 1-746
Cow position:
Alignm length: 755
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 11

Conread position: 1-746
Cow position:
Alignm length: 756
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 372, 359

Conread position: 1-746
Cow position:
Alignm length: 754
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 269

Conread position: 1-746
Cow position:
Alignm length: 756
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 116

Conread position: 1-1031
Cow position:
Alignm length: 1044
Alignm identity: 879
Alignm E-value: 0
Alignm gaps (pig, cow): 669, 738

Conread position: 2-584
Cow position:
Alignm length: 585
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 192

Conread position: 3-486
Cow position:
Alignm length: 484
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-516
Cow position:
Alignm length: 515
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 191

Conread position: 3-598
Cow position:
Alignm length: 596
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 3-598
Cow position:
Alignm length: 597
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 492, 142

Conread position: 3-744
Cow position:
Alignm length: 754
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 516, 544

Conread position: 20-746
Cow position:
Alignm length: 735
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 581, 12

Conread position: 22-598
Cow position:
Alignm length: 580
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 107

Conread position: 22-598
Cow position:
Alignm length: 586
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 107

Conread position: 22-599
Cow position:
Alignm length: 580
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 254

Conread position: 22-746
Cow position:
Alignm length: 734
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 353, 359

Conread position: 23-746
Cow position:
Alignm length: 732
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 497, 510

Conread position: 24-350
Cow position:
Alignm length: 329
Alignm identity: 215
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 209, 43

Conread position: 24-738
Cow position:
Alignm length: 725
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 105

Conread position: 32-598
Cow position:
Alignm length: 570
Alignm identity: 359
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 50, 33

Conread position: 33-429
Cow position:
Alignm length: 399
Alignm identity: 248
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 128, 87

Conread position: 35-598
Cow position:
Alignm length: 565
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 551, 258

Conread position: 35-746
Cow position:
Alignm length: 721
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 492, 506

Conread position: 36-345
Cow position:
Alignm length: 313
Alignm identity: 194
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 69, 87

Conread position: 36-599
Cow position:
Alignm length: 566
Alignm identity: 353
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 253, 238

Conread position: 36-600
Cow position:
Alignm length: 567
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 483, 496

Conread position: 36-667
Cow position:
Alignm length: 637
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 331, 325

Conread position: 40-649
Cow position:
Alignm length: 612
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 69

Conread position: 44-554
Cow position:
Alignm length: 511
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 44-598
Cow position:
Alignm length: 555
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 48-584
Cow position:
Alignm length: 538
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 98

Conread position: 55-598
Cow position:
Alignm length: 550
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 56

Conread position: 55-600
Cow position:
Alignm length: 547
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 143

Conread position: 55-657
Cow position:
Alignm length: 608
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 15

Conread position: 55-667
Cow position:
Alignm length: 618
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 52

Conread position: 55-741
Cow position:
Alignm length: 697
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 159

Conread position: 59-570
Cow position:
Alignm length: 514
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 301

Conread position: 68-598
Cow position:
Alignm length: 531
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 74-559
Cow position:
Alignm length: 486
Alignm identity: 305
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 187, 0

Conread position: 119-599
Cow position:
Alignm length: 481
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 0

Conread position: 120-597
Cow position:
Alignm length: 481
Alignm identity: 287
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 233, 84

Conread position: 130-599
Cow position:
Alignm length: 476
Alignm identity: 293
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 21

Conread position: 133-598
Cow position:
Alignm length: 466
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-667
Cow position:
Alignm length: 523
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 378, 387

Conread position: 150-746
Cow position:
Alignm length: 605
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 450, 461

Conread position: 154-746
Cow position:
Alignm length: 602
Alignm identity: 371
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 217, 158

Conread position: 198-667
Cow position:
Alignm length: 474
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 319, 263

Conread position: 202-597
Cow position:
Alignm length: 401
Alignm identity: 255
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 12, 88

Conread position: 203-430
Cow position:
Alignm length: 229
Alignm identity: 156
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 114, 29

Conread position: 222-599
Cow position:
Alignm length: 378
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 222-599
Cow position:
Alignm length: 379
Alignm identity: 237
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 85

Conread position: 235-742
Cow position:
Alignm length: 515
Alignm identity: 318
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 377, 66

Conread position: 296-667
Cow position:
Alignm length: 380
Alignm identity: 247
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 230, 73

Conread position: 309-741
Cow position:
Alignm length: 444
Alignm identity: 292
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 69, 59

Conread position: 310-599
Cow position:
Alignm length: 290
Alignm identity: 182
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 164, 0

Show alignments to all cow chromosomes.