Cow genome map
| Conread name: | Ss1.1-Mixg-0010f06.5 |
| Conread position: | 1-429 |
| Cow position: | chr2:86465799-86466225 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 266 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 406, 0 |
| Conread position: | 1-590 |
| Cow position: | chr2:82799470-82800060 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 273 |
| Conread position: | 1-598 |
| Cow position: | chr2:86465211-86465808 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 378, 384 |
| Conread position: | 3-598 |
| Cow position: | chr2:86465465-86466060 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 124 |
| Conread position: | 3-604 |
| Cow position: | chr2:78755366-78755964 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 138 |
| Conread position: | 24-597 |
| Cow position: | chr2:86465654-86466225 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 95 |
| Conread position: | 26-306 |
| Cow position: | chr2:82800168-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 68 |
| Conread position: | 26-598 |
| Cow position: | chr2:78755640-78756211 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 28 |
| Conread position: | 26-598 |
| Cow position: | chr2:82799580-82800152 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 408, 398 |
| Conread position: | 26-668 |
| Cow position: | chr2:78755138-78755775 (view UCSC Genome Browser custom track) |
| Alignm length: | 648 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 81 |
| Conread position: | 27-605 |
| Cow position: | chr2:78755807-78756381 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 349 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 237, 307 |
| Conread position: | 29-600 |
| Cow position: | chr2:86465070-86465642 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 374 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 317 |
| Conread position: | 34-598 |
| Cow position: | chr2:78754810-78755373 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 172 |
| Conread position: | 36-649 |
| Cow position: | chr2:82799674-82800287 (view UCSC Genome Browser custom track) |
| Alignm length: | 617 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 93 |
| Conread position: | 41-390 |
| Cow position: | chr2:82800099-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 41-598 |
| Cow position: | chr2:86465167-86465724 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 487, 467 |
| Conread position: | 48-594 |
| Cow position: | chr2:82799770-82800316 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 60 |
| Conread position: | 48-639 |
| Cow position: | chr2:86465596-86466185 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 244, 12 |
| Conread position: | 55-593 |
| Cow position: | chr2:78754177-78754712 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 325 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 309, 263 |
| Conread position: | 55-599 |
| Cow position: | chr2:78754595-78755123 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 345 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 447, 95 |
| Conread position: | 55-667 |
| Cow position: | chr2:78754511-78755110 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 546, 180 |
| Conread position: | 56-604 |
| Cow position: | chr2:78754262-78754805 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 335 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 158, 128 |
| Conread position: | 57-558 |
| Cow position: | chr2:82799947-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 57-592 |
| Cow position: | chr2:82799863-82800398 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 67 |
| Conread position: | 60-599 |
| Cow position: | chr2:78755507-78756043 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 12 |
| Conread position: | 66-592 |
| Cow position: | chr2:82799452-82799978 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 116-598 |
| Cow position: | chr2:86464992-86465472 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 296 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 320, 12 |
| Conread position: | 118-598 |
| Cow position: | chr2:78754810-78755290 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 434, 409 |
| Conread position: | 131-598 |
| Cow position: | chr2:5875107-5874639 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 275 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 461, 0 |
| Conread position: | 162-514 |
| Cow position: | chr2:5875160-5874808 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-654 |
| Cow position: | chr2:78754202-78754691 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 301 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 49, 43 |
| Conread position: | 195-600 |
| Cow position: | chr2:86464985-86465390 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 125, 114 |
| Conread position: | 202-516 |
| Cow position: | chr2:48689479-48689166 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 225-593 |
| Cow position: | chr2:48689540-48689173 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 150, 127 |
| Conread position: | 249-598 |
| Cow position: | chr2:82799467-82799816 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 19, 25 |
| Conread position: | 417-742 |
| Cow position: | chr2:82799467-82799799 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 110, 123 |
Show alignments to all cow chromosomes.