Cow genome map
| Conread name: | Ss1.1-Mixg-0010f06.5 |
| Conread position: | 1-326 |
| Cow position: | chr24:17013192-17013516 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 107, 126 |
| Conread position: | 1-573 |
| Cow position: | chr24:17070487-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 367, 377 |
| Conread position: | 1-585 |
| Cow position: | chr24:17078065-17077482 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 491, 479 |
| Conread position: | 1-598 |
| Cow position: | chr24:17035678-17035081 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 119 |
| Conread position: | 1-598 |
| Cow position: | chr24:17078233-17077636 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 518, 525 |
| Conread position: | 1-599 |
| Cow position: | chr24:17036350-17035752 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 528, 539 |
| Conread position: | 1-599 |
| Cow position: | chr24:17036519-17035920 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 540 |
| Conread position: | 1-739 |
| Cow position: | chr24:17035930-17035185 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 587, 610 |
| Conread position: | 3-492 |
| Cow position: | chr24:17070573-17071062 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-580 |
| Cow position: | chr24:17036096-17035519 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 126 |
| Conread position: | 26-569 |
| Cow position: | chr24:17035569-17035026 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 331 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 493, 521 |
| Conread position: | 26-598 |
| Cow position: | chr24:17036409-17035837 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 219 |
| Conread position: | 26-649 |
| Cow position: | chr24:17035989-17035366 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 26-657 |
| Cow position: | chr24:17035737-17035104 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 625, 0 |
| Conread position: | 26-741 |
| Cow position: | chr24:17036241-17035519 (view UCSC Genome Browser custom track) |
| Alignm length: | 727 |
| Alignm identity: | 461 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 51 |
| Conread position: | 27-598 |
| Cow position: | chr24:17078123-17077552 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 261 |
| Conread position: | 28-739 |
| Cow position: | chr24:17036155-17035437 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 502, 513 |
| Conread position: | 55-419 |
| Cow position: | chr24:17013162-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 229, 234 |
| Conread position: | 57-741 |
| Cow position: | chr24:17036546-17035855 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 368, 356 |
| Conread position: | 67-599 |
| Cow position: | chr24:17070469-17071001 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 53 |
| Conread position: | 69-598 |
| Cow position: | chr24:17070387-17070916 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 125-483 |
| Cow position: | chr24:17013148-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 157, 170 |
| Conread position: | 136-380 |
| Cow position: | chr24:16986425-16986670 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 130, 150 |
| Conread position: | 189-599 |
| Cow position: | chr24:17078297-17077887 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 210-587 |
| Cow position: | chr24:17013149-17013525 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 354, 0 |
| Conread position: | 240-450 |
| Cow position: | chr24:16986445-16986655 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 98, 88 |
| Conread position: | 294-597 |
| Cow position: | chr24:17013149-17013452 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 199 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 237, 247 |
| Conread position: | 324-518 |
| Cow position: | chr24:16986445-16986639 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 119, 99 |
| Conread position: | 324-649 |
| Cow position: | chr24:17036612-17036290 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 206, 60 |
| Conread position: | 377-599 |
| Cow position: | chr24:17013148-17013370 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 150, 164 |
| Conread position: | 408-599 |
| Cow position: | chr24:16986445-16986636 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 121, 133 |
Show alignments to all cow chromosomes.