Cow genome map
| Conread name: | Ss1.1-Mixg-0010f06.5 |
| Conread position: | 3-578 |
| Cow position: | chr6:49396077-49396646 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 340 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 537, 143 |
| Conread position: | 22-741 |
| Cow position: | chr6:49340369-49341095 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 86 |
| Conread position: | 24-598 |
| Cow position: | chr6:49395762-49396330 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 337 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 93, 99 |
| Conread position: | 27-598 |
| Cow position: | chr6:49396263-49396834 (view UCSC Genome Browser custom track) |
| Alignm length: | 575 |
| Alignm identity: | 346 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 184, 172 |
| Conread position: | 27-654 |
| Cow position: | chr6:49340794-49341423 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 86 |
| Conread position: | 27-657 |
| Cow position: | chr6:49395933-49396559 (view UCSC Genome Browser custom track) |
| Alignm length: | 638 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 110 |
| Conread position: | 34-649 |
| Cow position: | chr6:49340465-49341080 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 485, 505 |
| Conread position: | 35-328 |
| Cow position: | chr6:49341138-49341431 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 160, 148 |
| Conread position: | 36-412 |
| Cow position: | chr6:49341055-49341431 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 241 |
| Conread position: | 36-598 |
| Cow position: | chr6:49340635-49341197 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 79 |
| Conread position: | 41-580 |
| Cow position: | chr6:49340892-49341431 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 487, 494 |
| Conread position: | 44-741 |
| Cow position: | chr6:49340559-49341263 (view UCSC Genome Browser custom track) |
| Alignm length: | 708 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 484, 497 |
| Conread position: | 48-592 |
| Cow position: | chr6:49396452-49396996 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 320 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 56-599 |
| Cow position: | chr6:49396046-49396583 (view UCSC Genome Browser custom track) |
| Alignm length: | 544 |
| Alignm identity: | 329 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 57-517 |
| Cow position: | chr6:49428984-49429444 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 271 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 61 |
| Conread position: | 57-598 |
| Cow position: | chr6:49428900-49429441 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 314 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 47, 64 |
| Conread position: | 105-599 |
| Cow position: | chr6:49340368-49340861 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 329, 316 |
| Conread position: | 132-598 |
| Cow position: | chr6:49428387-49428853 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 279 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 305, 314 |
Show alignments to all cow chromosomes.