Cow genome map


           Conread name:
           Ss1.1-Mixn-0004e21.5
        

               Conread position:
               101-572
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 308
               

               Conread position:
               104-708
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               364
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               5, 318
               

               Conread position:
               104-708
               

               Cow position:
               
               

               Alignm length:
               612
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 59
               

               Conread position:
               105-376
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               105-541
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               265
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               105-542
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               277
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               35, 17
               

               Conread position:
               105-612
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               307
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               105-624
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               326
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               141, 158
               

               Conread position:
               105-656
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 151
               

               Conread position:
               105-658
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               336
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               118, 112
               

               Conread position:
               105-661
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               335
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               136, 156
               

               Conread position:
               105-708
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 15
               

               Conread position:
               105-708
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               363
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               134, 124
               

               Conread position:
               105-708
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               367
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               105-708
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               254, 245
               

               Conread position:
               105-708
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               368
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               134, 128
               

               Conread position:
               108-659
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               338
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               137, 123
               

               Conread position:
               108-708
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 54
               

               Conread position:
               108-708
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               308, 319
               

               Conread position:
               109-661
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 52
               

               Conread position:
               109-708
               

               Cow position:
               
               

               Alignm length:
               601
               

               Alignm identity:
               353
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               307, 299
               

               Conread position:
               109-708
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               350
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               232, 221
               

               Conread position:
               109-708
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               361
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               130, 122
               

               Conread position:
               112-537
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               280, 271
               

               Conread position:
               112-707
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 132
               

               Conread position:
               112-708
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 49
               

               Conread position:
               114-707
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               360
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               60, 69
               

               Conread position:
               114-707
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               116-706
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               386, 224
               

               Conread position:
               136-707
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               341
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               21, 15
               

               Conread position:
               139-707
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 22
               

               Conread position:
               169-660
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               305
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               370, 97
               

               Conread position:
               174-708
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 151
               

               Conread position:
               175-574
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               88, 81
               

               Conread position:
               178-658
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               291
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               178-701
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               321
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               63, 86
               

               Conread position:
               178-708
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               230, 102
               

               Conread position:
               178-708
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 152
               

               Conread position:
               184-708
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               320
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               152, 146
               

               Conread position:
               187-708
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               317
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               152, 143
               

               Conread position:
               190-656
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               73, 66
               

               Conread position:
               190-662
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               291
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               190-698
               

               Cow position:
               
               

               Alignm length:
               511
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               218, 240
               

               Conread position:
               190-706
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 67
               

               Conread position:
               190-707
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               311
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               306, 334
               

               Conread position:
               190-708
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               317
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               69, 82
               

               Conread position:
               190-708
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               311
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               148, 133
               

               Conread position:
               191-708
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 51
               

               Conread position:
               195-708
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               319
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               232, 228
               

               Conread position:
               196-708
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               314
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               145, 128
               

               Conread position:
               196-708
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               307
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               61, 68
               

               Conread position:
               197-707
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               308
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               66, 61
               

               Conread position:
               200-708
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               306
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               304, 218
               

               Conread position:
               262-625
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               151, 18
               

               Conread position:
               262-708
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               156, 169
               

               Conread position:
               265-701
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               259
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               404, 137
               

               Conread position:
               281-708
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 20
               

               Conread position:
               357-674
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               27, 32
               

               Conread position:
               358-708
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               145, 158
               
Show alignments to all cow chromosomes.