Cow genome map
| Conread name: | Ss1.1-Mixn-0004e21.5 |
| Conread position: | 104-707 |
| Cow position: | chr2:86465508-86466111 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 364 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 162, 130 |
| Conread position: | 104-708 |
| Cow position: | chr2:82799683-82800288 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 19 |
| Conread position: | 105-707 |
| Cow position: | chr2:5875107-5874505 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 366 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 29, 51 |
| Conread position: | 108-532 |
| Cow position: | chr2:82800024-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 264 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 228, 217 |
| Conread position: | 108-659 |
| Cow position: | chr2:82799856-82800407 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 323 |
| Conread position: | 108-707 |
| Cow position: | chr2:82799604-82800203 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 384 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 313 |
| Conread position: | 108-707 |
| Cow position: | chr2:86465428-86466027 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 354 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 109-383 |
| Cow position: | chr2:48689379-48689105 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 32 |
| Conread position: | 109-707 |
| Cow position: | chr2:86465177-86465775 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 360 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 139, 122 |
| Conread position: | 111-563 |
| Cow position: | chr2:5874849-5874397 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 24 |
| Conread position: | 111-664 |
| Cow position: | chr2:48689624-48689077 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 5 |
| Conread position: | 112-572 |
| Cow position: | chr2:5874932-5874472 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 285 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 112-670 |
| Cow position: | chr2:82799776-82800335 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 68 |
| Conread position: | 138-707 |
| Cow position: | chr2:82799466-82800035 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 139-707 |
| Cow position: | chr2:5875157-5874589 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 346 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 177-707 |
| Cow position: | chr2:5874951-5874421 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 318 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 69, 87 |
| Conread position: | 184-708 |
| Cow position: | chr2:78755070-78755592 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 316 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 58, 84 |
| Conread position: | 252-708 |
| Cow position: | chr2:78754802-78755258 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 74, 85 |
| Conread position: | 430-707 |
| Cow position: | chr2:48689477-48689201 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 250, 64 |
Show alignments to all cow chromosomes.