Cow genome map


           Conread name:
           Ss1.1-Mixn-0004e21.5
        

               Conread position:
               103-662
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               345
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               54, 58
               

               Conread position:
               104-411
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               5, 154
               

               Conread position:
               104-444
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               104-500
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               252
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               5, 58
               

               Conread position:
               104-625
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               329
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               5, 130
               

               Conread position:
               104-658
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 320
               

               Conread position:
               104-663
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               332
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               5, 134
               

               Conread position:
               104-699
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 130
               

               Conread position:
               104-706
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 58
               

               Conread position:
               104-707
               

               Cow position:
               
               

               Alignm length:
               610
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 57
               

               Conread position:
               105-708
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 0
               

               Conread position:
               108-550
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               300, 323
               

               Conread position:
               108-643
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 52
               

               Conread position:
               109-494
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               233
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               150, 136
               

               Conread position:
               111-405
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               11, 146
               

               Conread position:
               112-574
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               306, 319
               

               Conread position:
               112-708
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               355
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               45, 51
               

               Conread position:
               115-707
               

               Cow position:
               
               

               Alignm length:
               596
               

               Alignm identity:
               356
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               42, 21
               

               Conread position:
               118-574
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 213
               

               Conread position:
               129-708
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 128
               

               Conread position:
               130-704
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 31
               

               Conread position:
               139-674
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 22
               

               Conread position:
               139-706
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               347
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               253, 247
               

               Conread position:
               139-708
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 22
               

               Conread position:
               139-708
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 94
               

               Conread position:
               184-707
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 248
               

               Conread position:
               190-528
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               212
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               223, 241
               

               Conread position:
               190-695
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 79
               

               Conread position:
               190-708
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 21
               

               Conread position:
               192-641
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               47, 41
               

               Conread position:
               192-707
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               310
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               226, 236
               

               Conread position:
               196-592
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               259
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               45, 35
               

               Conread position:
               196-656
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               217, 234
               

               Conread position:
               196-662
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               290
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               234, 224
               

               Conread position:
               197-635
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               42, 48
               

               Conread position:
               199-707
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               308
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               62, 57
               

               Conread position:
               208-530
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               55, 49
               

               Conread position:
               208-657
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 117
               

               Conread position:
               218-651
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               213, 42
               

               Conread position:
               239-708
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               274
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               179, 192
               

               Conread position:
               257-707
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               295
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               99, 68
               

               Conread position:
               273-708
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               83, 59
               

               Conread position:
               276-707
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               280-707
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               140, 128
               

               Conread position:
               356-688
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               226
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               53, 71
               

               Conread position:
               358-708
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               70, 12
               

               Conread position:
               359-669
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               444-708
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               461-707
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               49, 55
               
Show alignments to all cow chromosomes.