Cow genome map
| Conread name: | Ss1.1-Mixn-0004e21.5 |
| Conread position: | 77-658 |
| Cow position: | chr24:17078215-17077634 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 314 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 184, 179 |
| Conread position: | 104-373 |
| Cow position: | chr24:17013236-17013506 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 104-614 |
| Cow position: | chr24:17078021-17077510 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 322 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 5, 58 |
| Conread position: | 104-708 |
| Cow position: | chr24:17035634-17035029 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 153 |
| Conread position: | 104-708 |
| Cow position: | chr24:17035970-17035365 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 362 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 5, 58 |
| Conread position: | 104-708 |
| Cow position: | chr24:17036138-17035533 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 365 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 5, 58 |
| Conread position: | 105-708 |
| Cow position: | chr24:17035800-17035197 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 236 |
| Conread position: | 105-708 |
| Cow position: | chr24:17078355-17077752 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 15 |
| Conread position: | 106-708 |
| Cow position: | chr24:17036554-17035953 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 9 |
| Conread position: | 108-704 |
| Cow position: | chr24:17035545-17034949 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 358 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 28, 33 |
| Conread position: | 109-661 |
| Cow position: | chr24:17035712-17035160 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 333 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-708 |
| Cow position: | chr24:17036216-17035617 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 52 |
| Conread position: | 109-708 |
| Cow position: | chr24:17036468-17035869 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 277 |
| Conread position: | 109-708 |
| Cow position: | chr24:17078267-17077668 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 331 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 319, 314 |
| Conread position: | 112-530 |
| Cow position: | chr24:17070624-17071042 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 264 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 127, 121 |
| Conread position: | 112-700 |
| Cow position: | chr24:17078096-17077508 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 144 |
| Conread position: | 139-698 |
| Cow position: | chr24:17070483-17071042 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 336 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 274, 291 |
| Conread position: | 197-494 |
| Cow position: | chr24:17013162-17013459 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 148, 143 |
| Conread position: | 233-708 |
| Cow position: | chr24:17070409-17070884 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 430, 436 |
| Conread position: | 365-708 |
| Cow position: | chr24:17013162-17013505 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 53, 63 |
| Conread position: | 461-666 |
| Cow position: | chr24:16986440-16986646 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 53 |
Show alignments to all cow chromosomes.