Cow genome map
| Conread name: | Ss1.1-Mixn-0004e21.5 |
| Conread position: | 95-613 |
| Cow position: | chr28:34696057-34696578 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 69 |
| Conread position: | 104-575 |
| Cow position: | chr28:34673427-34673899 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 298 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 5, 59 |
| Conread position: | 105-708 |
| Cow position: | chr28:7757490-7758093 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 355 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 231, 211 |
| Conread position: | 105-708 |
| Cow position: | chr28:9253009-9253612 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 60 |
| Conread position: | 108-368 |
| Cow position: | chr28:34696325-34696585 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 108-375 |
| Cow position: | chr28:33210389-33210657 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 53 |
| Conread position: | 108-707 |
| Cow position: | chr28:11334144-11333545 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 360 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 137, 153 |
| Conread position: | 108-707 |
| Cow position: | chr28:34695905-34696504 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 33 |
| Conread position: | 109-573 |
| Cow position: | chr28:7757830-7758294 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 274 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 67 |
| Conread position: | 109-657 |
| Cow position: | chr28:7757662-7758210 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 333 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 46, 56 |
| Conread position: | 109-657 |
| Cow position: | chr28:11333891-11333349 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 335 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 25, 32 |
| Conread position: | 109-708 |
| Cow position: | chr28:9298561-9299156 (view UCSC Genome Browser custom track) |
| Alignm length: | 605 |
| Alignm identity: | 352 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 57 |
| Conread position: | 112-650 |
| Cow position: | chr28:7757413-7757951 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 325 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 31, 52 |
| Conread position: | 113-687 |
| Cow position: | chr28:34673353-34673927 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 344 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 60, 44 |
| Conread position: | 115-687 |
| Cow position: | chr28:34695996-34696568 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 328, 320 |
| Conread position: | 139-542 |
| Cow position: | chr28:33210252-33210656 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 268 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 18, 22 |
| Conread position: | 139-707 |
| Cow position: | chr28:34695852-34696420 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 23 |
| Conread position: | 139-708 |
| Cow position: | chr28:7757608-7758177 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 340 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 124, 117 |
| Conread position: | 178-699 |
| Cow position: | chr28:11333990-11333469 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 250, 230 |
| Conread position: | 184-707 |
| Cow position: | chr28:11334152-11333629 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 496, 489 |
| Conread position: | 187-708 |
| Cow position: | chr28:7757404-7757925 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 319 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 74, 66 |
| Conread position: | 210-707 |
| Cow position: | chr28:34695839-34696336 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 199 |
| Conread position: | 244-708 |
| Cow position: | chr28:7757378-7757841 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 284 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 92, 22 |
| Conread position: | 266-706 |
| Cow position: | chr28:34695811-34696251 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 60 |
| Conread position: | 268-708 |
| Cow position: | chr28:9253004-9253444 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 282-708 |
| Cow position: | chr28:7758323-7758749 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 127, 144 |
| Conread position: | 367-707 |
| Cow position: | chr28:33210228-33210569 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 198, 214 |
| Conread position: | 451-708 |
| Cow position: | chr28:33210228-33210485 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 213, 217 |
| Conread position: | 452-708 |
| Cow position: | chr28:34673356-34673612 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.