Cow genome map

Conread name: Ss1.1-Mixn-0004e21.5

Conread position: 99-622
Cow position: chr6:49362322-49362834 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 323
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 309

Conread position: 103-707
Cow position: chr6:49428383-49428988 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 568

Conread position: 105-429
Cow position: chr6:49429226-49429548 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 216
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 268, 0

Conread position: 105-650
Cow position: chr6:49340898-49341443 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 333
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 31, 36

Conread position: 108-574
Cow position: chr6:49429061-49429525 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 50

Conread position: 108-653
Cow position: chr6:49396454-49396999 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 12

Conread position: 108-706
Cow position: chr6:49428809-49429407 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 394, 403

Conread position: 108-707
Cow position: chr6:49428305-49428904 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 300

Conread position: 108-707
Cow position: chr6:49428473-49429072 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 53

Conread position: 108-707
Cow position: chr6:49428641-49429240 (view UCSC Genome Browser custom track)
Alignm length: 601
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 138

Conread position: 108-707
Cow position: chr6:49428893-49429492 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 108-708
Cow position: chr6:49396370-49396970 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 53

Conread position: 108-708
Cow position: chr6:49428725-49429325 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 407, 401

Conread position: 109-707
Cow position: chr6:49340566-49341164 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 13

Conread position: 109-708
Cow position: chr6:49340650-49341249 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 13

Conread position: 109-708
Cow position: chr6:49340734-49341333 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 152

Conread position: 131-688
Cow position: chr6:49396147-49396698 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 83

Conread position: 139-707
Cow position: chr6:49395987-49396549 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 244

Conread position: 139-707
Cow position: chr6:49428252-49428820 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 210

Conread position: 139-708
Cow position: chr6:49396317-49396886 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 292

Conread position: 168-707
Cow position: chr6:49361902-49362427 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 341
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 83, 14

Conread position: 177-708
Cow position: chr6:49340886-49341417 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 327
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 86, 82

Conread position: 190-706
Cow position: chr6:49362330-49362834 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 89

Conread position: 190-708
Cow position: chr6:49396122-49396634 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 107

Conread position: 190-708
Cow position: chr6:49396284-49396802 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 321

Conread position: 194-707
Cow position: chr6:49428223-49428736 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 321, 315

Conread position: 196-707
Cow position: chr6:49362096-49362595 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 464, 218

Conread position: 196-707
Cow position: chr6:49395792-49396297 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 306
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 73, 61

Conread position: 198-708
Cow position: chr6:49340403-49340913 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 312
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 65, 59

Conread position: 212-708
Cow position: chr6:49395892-49396382 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 19

Conread position: 241-707
Cow position: chr6:49340362-49340828 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 287
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 167, 189

Conread position: 271-706
Cow position: chr6:49362327-49362750 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 280
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 304, 0

Conread position: 286-707
Cow position: chr6:49428063-49428484 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 269
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 132, 152

Show alignments to all cow chromosomes.