Cow genome map


           Conread name:
           Ss1.1-Mixn-0004e21.5
        

               Conread position:
               103-546
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               6, 328
               

               Conread position:
               104-657
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               341
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               5, 305
               

               Conread position:
               104-707
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               348
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               5, 305
               

               Conread position:
               105-574
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               135, 148
               

               Conread position:
               105-591
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               317, 303
               

               Conread position:
               105-704
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               362
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               29, 36
               

               Conread position:
               105-708
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               363
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               52, 56
               

               Conread position:
               105-708
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               358
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               313, 303
               

               Conread position:
               107-701
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               345
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               53, 73
               

               Conread position:
               108-577
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               279
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               109-527
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               27, 32
               

               Conread position:
               109-632
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               320
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               154, 147
               

               Conread position:
               109-669
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               347
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               25, 32
               

               Conread position:
               109-695
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               357
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               109-708
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               353
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               137, 132
               

               Conread position:
               109-708
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               358
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               65, 76
               

               Conread position:
               109-708
               

               Cow position:
               
               

               Alignm length:
               605
               

               Alignm identity:
               370
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               152, 148
               

               Conread position:
               109-708
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               309, 315
               

               Conread position:
               109-708
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               352
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               27, 32
               

               Conread position:
               115-708
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               356
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               146, 141
               

               Conread position:
               115-708
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               358
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               148, 141
               

               Conread position:
               139-494
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               18, 23
               

               Conread position:
               139-702
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               342
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               139-707
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               346
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               109, 128
               

               Conread position:
               151-705
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               328
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               269, 279
               

               Conread position:
               169-708
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               331
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               94, 87
               

               Conread position:
               169-708
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               521, 526
               

               Conread position:
               174-707
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               327
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               89, 74
               

               Conread position:
               175-659
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               301
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               79, 58
               

               Conread position:
               184-581
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               79, 73
               

               Conread position:
               184-659
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               224, 240
               

               Conread position:
               187-650
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               281
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               44, 72
               

               Conread position:
               187-706
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               304
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               76, 47
               

               Conread position:
               187-708
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               313
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               172, 162
               

               Conread position:
               187-708
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               302
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               238, 221
               

               Conread position:
               195-708
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               302
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               196-707
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               303
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               61, 35
               

               Conread position:
               223-708
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               297
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               265-704
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               275
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               240, 248
               

               Conread position:
               265-707
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               71, 66
               

               Conread position:
               344-708
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               85, 79
               

               Conread position:
               346-708
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               73, 84
               

               Conread position:
               358-706
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               61, 74
               
Show alignments to all cow chromosomes.