Cow genome map
| Conread name: | Ss1.1-Mixn-0004e21.5 |
| Conread position: | 102-706 |
| Cow position: | chrX:13826878-13826273 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 383 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 69 |
| Conread position: | 103-412 |
| Cow position: | chrX:14181319-14181010 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 6, 162 |
| Conread position: | 105-657 |
| Cow position: | chrX:25309880-25310432 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 336 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 209, 238 |
| Conread position: | 105-707 |
| Cow position: | chrX:25325261-25324659 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 29 |
| Conread position: | 108-707 |
| Cow position: | chrX:25325594-25324995 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 319, 301 |
| Conread position: | 109-704 |
| Cow position: | chrX:25325005-25324410 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 366 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 112-657 |
| Cow position: | chrX:13826783-13826238 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 152 |
| Conread position: | 112-657 |
| Cow position: | chrX:14181646-14181100 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 320 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 18, 80 |
| Conread position: | 113-574 |
| Cow position: | chrX:29045178-29044717 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 111, 105 |
| Conread position: | 113-657 |
| Cow position: | chrX:14181560-14181016 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 331 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 125, 149 |
| Conread position: | 122-533 |
| Cow position: | chrX:14181384-14180972 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 253 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 9, 36 |
| Conread position: | 139-706 |
| Cow position: | chrX:25325395-25324828 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 326 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 169-708 |
| Cow position: | chrX:25310028-25310567 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 322 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 170, 156 |
| Conread position: | 169-708 |
| Cow position: | chrX:25324777-25324238 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 94, 87 |
| Conread position: | 184-708 |
| Cow position: | chrX:29045356-29044835 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 308 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 28 |
| Conread position: | 187-708 |
| Cow position: | chrX:25309878-25310399 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 322 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 58, 47 |
| Conread position: | 190-708 |
| Cow position: | chrX:25325092-25324574 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 326 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 73, 66 |
| Conread position: | 190-708 |
| Cow position: | chrX:25325428-25324910 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 328 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 73, 66 |
| Conread position: | 190-708 |
| Cow position: | chrX:25325764-25325246 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 310 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 202-705 |
| Cow position: | chrX:14181638-14181136 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 299 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 61, 8 |
Show alignments to all cow chromosomes.