Cow genome map


           Conread name:
           Ss1.1-Mixn-0004f09.5
        

               Conread position:
               4-143
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 48
               

               Conread position:
               4-147
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 75
               

               Conread position:
               5-137
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               5-223
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               30-166
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               104-548
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 161
               

               Conread position:
               248-558
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               72, 44
               

               Conread position:
               260-552
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               86, 20
               

               Conread position:
               260-559
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               264-556
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 28
               

               Conread position:
               267-476
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               145, 9
               

               Conread position:
               268-557
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               130, 13
               

               Conread position:
               269-501
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               14, 73
               

               Conread position:
               270-559
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               92, 55
               

               Conread position:
               275-508
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               281-570
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               102, 83
               

               Conread position:
               282-515
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               130, 16
               

               Conread position:
               285-530
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               208, 77
               

               Conread position:
               287-560
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               204
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               111, 11
               

               Conread position:
               287-575
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               107, 9
               

               Conread position:
               289-557
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               104, 11
               

               Conread position:
               289-567
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               105, 14
               

               Conread position:
               290-456
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 8
               

               Conread position:
               290-558
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               63, 75
               

               Conread position:
               294-557
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               225, 65
               

               Conread position:
               295-558
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               98, 69
               

               Conread position:
               305-557
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               93, 5
               

               Conread position:
               317-557
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               61, 45
               

               Conread position:
               320-556
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 28
               

               Conread position:
               323-557
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               332-557
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               84, 30
               

               Conread position:
               333-555
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               53, 30
               

               Conread position:
               334-563
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               366-557
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               28, 115
               

               Conread position:
               366-557
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               32, 173
               

               Conread position:
               370-531
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               21, 106
               

               Conread position:
               378-548
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 136
               

               Conread position:
               392-557
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               21, 125
               

               Conread position:
               402-558
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               104, 0
               
Show alignments to all cow chromosomes.