Cow genome map
| Conread name: | Ss1.1-Mixn-0004f09.5 |
| Conread position: | 5-145 |
| Cow position: | chr12:39640671-39640531 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 14, 45 |
| Conread position: | 186-504 |
| Cow position: | chr12:9233424-9233110 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 7 |
| Conread position: | 191-557 |
| Cow position: | chr12:9956258-9955893 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 90 |
| Conread position: | 191-558 |
| Cow position: | chr12:8259979-8259625 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 86 |
| Conread position: | 192-391 |
| Cow position: | chr12:37384516-37384311 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 87, 198 |
| Conread position: | 192-399 |
| Cow position: | chr12:37389516-37389314 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 201, 71 |
| Conread position: | 245-491 |
| Cow position: | chr12:15178924-15178685 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 21, 44 |
| Conread position: | 247-557 |
| Cow position: | chr12:8978500-8978807 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 6, 30 |
| Conread position: | 251-565 |
| Cow position: | chr12:4541579-4541275 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 231 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 143, 20 |
| Conread position: | 275-469 |
| Cow position: | chr12:43016217-43016021 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 22 |
| Conread position: | 285-557 |
| Cow position: | chr12:31622126-31621858 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 8, 41 |
| Conread position: | 302-546 |
| Cow position: | chr12:9381899-9382138 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 92, 23 |
| Conread position: | 303-557 |
| Cow position: | chr12:2911314-2911055 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 79, 61 |
| Conread position: | 307-570 |
| Cow position: | chr12:34408700-34408963 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 87, 34 |
| Conread position: | 310-565 |
| Cow position: | chr12:39571793-39572048 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 84, 54 |
| Conread position: | 311-562 |
| Cow position: | chr12:3016366-3016116 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 79, 53 |
| Conread position: | 332-519 |
| Cow position: | chr12:43972385-43972576 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 384-562 |
| Cow position: | chr12:21241848-21242024 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 26, 88 |
| Conread position: | 418-558 |
| Cow position: | chr12:39550828-39550967 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 86, 115 |
Show alignments to all cow chromosomes.