Cow genome map
| Conread name: | Ss1.1-Mixn-0004f09.5 |
| Conread position: | 25-288 |
| Cow position: | chr13:33295455-33295732 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 99, 228 |
| Conread position: | 146-332 |
| Cow position: | chr13:19440773-19440585 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 29, 136 |
| Conread position: | 181-547 |
| Cow position: | chr13:33245153-33244787 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 11 |
| Conread position: | 188-545 |
| Cow position: | chr13:17026609-17026257 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 42 |
| Conread position: | 192-378 |
| Cow position: | chr13:6170689-6170506 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 192-437 |
| Cow position: | chr13:54348086-54347840 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 31, 90 |
| Conread position: | 245-564 |
| Cow position: | chr13:30329982-30329672 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 14, 36 |
| Conread position: | 250-557 |
| Cow position: | chr13:15700806-15701107 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 229 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 148, 26 |
| Conread position: | 281-545 |
| Cow position: | chr13:52288611-52288881 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 203 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 54, 84 |
| Conread position: | 282-557 |
| Cow position: | chr13:17968610-17968338 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 199 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 112, 16 |
| Conread position: | 285-525 |
| Cow position: | chr13:33321776-33322012 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 47 |
| Conread position: | 289-562 |
| Cow position: | chr13:53189390-53189653 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 195 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 105, 9 |
| Conread position: | 303-504 |
| Cow position: | chr13:47664250-47664044 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 79, 63 |
| Conread position: | 303-541 |
| Cow position: | chr13:51924822-51925063 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 76, 59 |
| Conread position: | 332-558 |
| Cow position: | chr13:35026133-35026353 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 163, 32 |
| Conread position: | 351-558 |
| Cow position: | chr13:45321252-45321465 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 12, 188 |
| Conread position: | 369-548 |
| Cow position: | chr13:47645345-47645165 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 26, 85 |
| Conread position: | 373-557 |
| Cow position: | chr13:42570884-42570697 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 107 |
| Conread position: | 383-558 |
| Cow position: | chr13:12243470-12243298 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 383-558 |
| Cow position: | chr13:52190322-52190496 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 90 |
| Conread position: | 415-558 |
| Cow position: | chr13:33296319-33296459 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 420-565 |
| Cow position: | chr13:5248534-5248391 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 38, 79 |
Show alignments to all cow chromosomes.