Cow genome map
| Conread name: | Ss1.1-Mixn-0004f09.5 |
| Conread position: | 4-147 |
| Cow position: | chr15:23078941-23079086 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 14-147 |
| Cow position: | chr15:26614584-26614718 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 23-243 |
| Cow position: | chr15:11344937-11345153 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 98, 144 |
| Conread position: | 26-382 |
| Cow position: | chr15:25046038-25045688 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 260 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 95, 224 |
| Conread position: | 146-554 |
| Cow position: | chr15:23079107-23079500 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 54 |
| Conread position: | 189-305 |
| Cow position: | chr15:26615065-26615180 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 192-471 |
| Cow position: | chr15:25070961-25071231 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 192, 108 |
| Conread position: | 194-558 |
| Cow position: | chr15:20127767-20128130 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 87 |
| Conread position: | 228-381 |
| Cow position: | chr15:6172878-6173034 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 103, 54 |
| Conread position: | 241-525 |
| Cow position: | chr15:1998688-1998972 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 246-555 |
| Cow position: | chr15:3031314-3031016 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 142, 20 |
| Conread position: | 262-557 |
| Cow position: | chr15:11620710-11620434 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 111, 18 |
| Conread position: | 281-526 |
| Cow position: | chr15:17289303-17289067 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 290-540 |
| Cow position: | chr15:10539576-10539832 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 72, 8 |
| Conread position: | 302-531 |
| Cow position: | chr15:26616690-26616920 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 80, 60 |
| Conread position: | 303-541 |
| Cow position: | chr15:14258016-14257782 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 109, 62 |
| Conread position: | 303-558 |
| Cow position: | chr15:234070-233798 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 61 |
| Conread position: | 317-557 |
| Cow position: | chr15:3033546-3033306 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 36, 46 |
| Conread position: | 369-534 |
| Cow position: | chr15:6173260-6173431 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 21, 130 |
| Conread position: | 381-557 |
| Cow position: | chr15:11347911-11348090 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 384-540 |
| Cow position: | chr15:18788381-18788538 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 26, 51 |
| Conread position: | 388-555 |
| Cow position: | chr15:51452228-51452058 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 408-540 |
| Cow position: | chr15:25043767-25043633 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 410-557 |
| Cow position: | chr15:15887069-15887211 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 31, 6 |
Show alignments to all cow chromosomes.