Cow genome map


           Conread name:
           Ss1.1-Mixn-0004f09.5
        

               Conread position:
               2-548
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 257
               

               Conread position:
               5-147
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               25-473
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 16
               

               Conread position:
               66-557
               

               Cow position:
               
               

               Alignm length:
               504
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 138
               

               Conread position:
               72-557
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 215
               

               Conread position:
               146-557
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 133
               

               Conread position:
               181-438
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               170, 11
               

               Conread position:
               187-558
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 97
               

               Conread position:
               192-547
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               260
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               31, 303
               

               Conread position:
               192-565
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 89
               

               Conread position:
               222-557
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 59
               

               Conread position:
               245-556
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               101, 35
               

               Conread position:
               245-557
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               71, 48
               

               Conread position:
               247-456
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               6, 28
               

               Conread position:
               247-555
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               147, 30
               

               Conread position:
               247-558
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 30
               

               Conread position:
               260-557
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               134, 16
               

               Conread position:
               262-558
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               118, 20
               

               Conread position:
               268-491
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               144, 12
               

               Conread position:
               285-541
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               77, 93
               

               Conread position:
               285-557
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 79
               

               Conread position:
               285-566
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               97, 38
               

               Conread position:
               289-557
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               202
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               104, 75
               

               Conread position:
               290-501
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               295-540
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               99, 36
               

               Conread position:
               304-556
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               90, 60
               

               Conread position:
               308-559
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               309-557
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               85, 55
               

               Conread position:
               333-556
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 35
               

               Conread position:
               364-564
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               30, 112
               

               Conread position:
               365-499
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               370-548
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               28, 79
               

               Conread position:
               378-557
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               16, 160
               

               Conread position:
               382-570
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 67
               

               Conread position:
               390-557
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               22, 147
               

               Conread position:
               393-547
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               19, 122
               

               Conread position:
               411-559
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               75, 0
               
Show alignments to all cow chromosomes.