Cow genome map


           Conread name:
           Ss1.1-Mixn-0004f09.5
        

               Conread position:
               3-145
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 107
               

               Conread position:
               5-123
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 110
               

               Conread position:
               192-484
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               161, 86
               

               Conread position:
               192-492
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 134
               

               Conread position:
               195-558
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 86
               

               Conread position:
               197-401
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               119, 34
               

               Conread position:
               232-499
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               242-557
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               77, 38
               

               Conread position:
               261-557
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 19
               

               Conread position:
               281-504
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               102, 83
               

               Conread position:
               282-557
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               111, 16
               

               Conread position:
               290-480
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 82
               

               Conread position:
               303-557
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 61
               

               Conread position:
               303-557
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               91, 15
               

               Conread position:
               304-493
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               5, 30
               

               Conread position:
               309-558
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               23, 57
               

               Conread position:
               326-566
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               13, 5
               

               Conread position:
               351-557
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               37, 13
               

               Conread position:
               380-515
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               115, 12
               

               Conread position:
               385-557
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               27, 9
               

               Conread position:
               389-557
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               23, 148
               

               Conread position:
               403-568
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               42, 69
               

               Conread position:
               405-557
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 129
               

               Conread position:
               405-557
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               91, 129
               

               Conread position:
               406-569
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               95, 0
               
Show alignments to all cow chromosomes.