Cow genome map
| Conread name: | Ss1.1-Mixn-0004f09.5 |
| Conread position: | 4-148 |
| Cow position: | chr20:35609561-35609705 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 5-144 |
| Cow position: | chr20:33201553-33201692 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 14, 32 |
| Conread position: | 5-148 |
| Cow position: | chr20:40225731-40225589 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 5-260 |
| Cow position: | chr20:37056793-37057058 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 91-320 |
| Cow position: | chr20:37396759-37396528 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 33, 74 |
| Conread position: | 192-476 |
| Cow position: | chr20:20142872-20142590 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 86 |
| Conread position: | 193-557 |
| Cow position: | chr20:6255405-6255757 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 85 |
| Conread position: | 237-356 |
| Cow position: | chr20:24329199-24329081 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 244-558 |
| Cow position: | chr20:27651807-27651492 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 16, 9 |
| Conread position: | 245-560 |
| Cow position: | chr20:3315055-3315375 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 262-558 |
| Cow position: | chr20:27997375-27997653 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 233, 23 |
| Conread position: | 281-563 |
| Cow position: | chr20:19124836-19124549 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 96, 83 |
| Conread position: | 289-476 |
| Cow position: | chr20:23760879-23761068 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 95, 19 |
| Conread position: | 303-470 |
| Cow position: | chr20:36174717-36174546 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 85, 56 |
| Conread position: | 303-557 |
| Cow position: | chr20:35652253-35652507 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 10, 62 |
| Conread position: | 303-558 |
| Cow position: | chr20:37057569-37057813 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 108, 59 |
| Conread position: | 308-557 |
| Cow position: | chr20:34105916-34105663 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 71, 56 |
| Conread position: | 319-557 |
| Cow position: | chr20:7380992-7380753 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 42 |
| Conread position: | 359-559 |
| Cow position: | chr20:31447973-31448173 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 51, 25 |
| Conread position: | 376-557 |
| Cow position: | chr20:38558238-38558058 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 12, 101 |
| Conread position: | 405-557 |
| Cow position: | chr20:35723225-35723378 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 93, 36 |
Show alignments to all cow chromosomes.