Cow genome map
| Conread name: | Ss1.1-Mixn-0004f09.5 |
| Conread position: | 192-381 |
| Cow position: | chr23:10720732-10720545 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 108, 81 |
| Conread position: | 192-523 |
| Cow position: | chr23:2536351-2536678 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 192-548 |
| Cow position: | chr23:37977446-37977096 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 257 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 191, 38 |
| Conread position: | 198-546 |
| Cow position: | chr23:18271749-18272103 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 56 |
| Conread position: | 214-566 |
| Cow position: | chr23:37098631-37098984 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 7 |
| Conread position: | 245-482 |
| Cow position: | chr23:3552608-3552369 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 245-548 |
| Cow position: | chr23:1165132-1164828 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 216 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 148, 35 |
| Conread position: | 245-572 |
| Cow position: | chr23:4506524-4506854 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 133, 38 |
| Conread position: | 247-557 |
| Cow position: | chr23:5424632-5424940 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 215 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 165, 24 |
| Conread position: | 252-561 |
| Cow position: | chr23:35974362-35974067 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 11, 30 |
| Conread position: | 253-558 |
| Cow position: | chr23:9728602-9728300 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 13 |
| Conread position: | 260-469 |
| Cow position: | chr23:3531618-3531825 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 138, 16 |
| Conread position: | 283-567 |
| Cow position: | chr23:13562521-13562234 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 6 |
| Conread position: | 289-547 |
| Cow position: | chr23:21730304-21730043 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 9, 102 |
| Conread position: | 290-531 |
| Cow position: | chr23:37136192-37135938 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 297-530 |
| Cow position: | chr23:9463746-9463974 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 115, 50 |
| Conread position: | 302-535 |
| Cow position: | chr23:39078331-39078098 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 108, 62 |
| Conread position: | 302-548 |
| Cow position: | chr23:39092562-39092799 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 111, 62 |
| Conread position: | 347-557 |
| Cow position: | chr23:3521777-3521982 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 17 |
| Conread position: | 365-557 |
| Cow position: | chr23:20785707-20785899 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 45, 108 |
| Conread position: | 376-560 |
| Cow position: | chr23:14176838-14177020 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 378-551 |
| Cow position: | chr23:38426639-38426805 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 142, 44 |
| Conread position: | 389-562 |
| Cow position: | chr23:39491382-39491207 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 6, 146 |
| Conread position: | 393-559 |
| Cow position: | chr23:10720207-10720043 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 37 |
Show alignments to all cow chromosomes.