Cow genome map
| Conread name: | Ss1.1-Mixn-0004f09.5 |
| Conread position: | 4-143 |
| Cow position: | chr27:25297923-25298066 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 4-148 |
| Cow position: | chr27:20350278-20350423 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 37 |
| Conread position: | 192-419 |
| Cow position: | chr27:5629176-5628955 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 145, 38 |
| Conread position: | 244-562 |
| Cow position: | chr27:22727574-22727885 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 48, 24 |
| Conread position: | 245-557 |
| Cow position: | chr27:26465645-26465322 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 235 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 251-499 |
| Cow position: | chr27:26444277-26444510 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 260-528 |
| Cow position: | chr27:15106273-15106000 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 46, 20 |
| Conread position: | 278-530 |
| Cow position: | chr27:24717748-24718004 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 115, 10 |
| Conread position: | 282-559 |
| Cow position: | chr27:27412680-27412955 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 285-559 |
| Cow position: | chr27:27714783-27715058 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 109, 45 |
| Conread position: | 310-557 |
| Cow position: | chr27:29664546-29664793 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 80, 21 |
| Conread position: | 332-547 |
| Cow position: | chr27:26470347-26470134 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 335-557 |
| Cow position: | chr27:3794652-3794426 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 22 |
| Conread position: | 411-557 |
| Cow position: | chr27:4473933-4473783 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 90, 0 |
Show alignments to all cow chromosomes.