Cow genome map
| Conread name: | Ss1.1-Mixn-0004f09.5 |
| Conread position: | 5-275 |
| Cow position: | chr28:15176003-15176277 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 17, 153 |
| Conread position: | 77-409 |
| Cow position: | chr28:14481126-14480799 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 48, 78 |
| Conread position: | 192-558 |
| Cow position: | chr28:23802151-23801794 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 38 |
| Conread position: | 192-563 |
| Cow position: | chr28:32009122-32009466 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 272 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 60, 89 |
| Conread position: | 246-566 |
| Cow position: | chr28:18714257-18714577 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 233 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 148, 37 |
| Conread position: | 251-557 |
| Cow position: | chr28:9792656-9792959 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 83, 26 |
| Conread position: | 261-570 |
| Cow position: | chr28:1656573-1656869 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 112, 19 |
| Conread position: | 271-549 |
| Cow position: | chr28:5414569-5414844 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 66, 27 |
| Conread position: | 277-456 |
| Cow position: | chr28:10778970-10778794 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 106, 21 |
| Conread position: | 277-538 |
| Cow position: | chr28:10695651-10695396 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 55, 26 |
| Conread position: | 281-557 |
| Cow position: | chr28:15982404-15982681 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 90, 17 |
| Conread position: | 283-544 |
| Cow position: | chr28:5969376-5969106 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 283-559 |
| Cow position: | chr28:11279465-11279204 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 10, 43 |
| Conread position: | 297-557 |
| Cow position: | chr28:14483149-14482906 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 206, 68 |
| Conread position: | 317-561 |
| Cow position: | chr28:11097287-11097521 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 128, 45 |
| Conread position: | 321-557 |
| Cow position: | chr28:34761307-34761543 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 73, 43 |
| Conread position: | 332-557 |
| Cow position: | chr28:4133551-4133774 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 41, 124 |
| Conread position: | 341-555 |
| Cow position: | chr28:14214566-14214356 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 71, 24 |
| Conread position: | 341-557 |
| Cow position: | chr28:87498-87280 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 365-555 |
| Cow position: | chr28:18585003-18584812 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 28, 112 |
| Conread position: | 411-553 |
| Cow position: | chr28:14480488-14480347 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.