Cow genome map
| Conread name: | Ss1.1-Mixn-0004f09.5 |
| Conread position: | 192-458 |
| Cow position: | chr29:16336350-16336081 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 85 |
| Conread position: | 192-570 |
| Cow position: | chr29:4245532-4245155 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 29 |
| Conread position: | 201-548 |
| Cow position: | chr29:13562273-13561927 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 80 |
| Conread position: | 216-557 |
| Cow position: | chr29:45620182-45619845 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 62 |
| Conread position: | 245-485 |
| Cow position: | chr29:1627487-1627728 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 143, 35 |
| Conread position: | 261-557 |
| Cow position: | chr29:13386960-13386667 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 76, 19 |
| Conread position: | 262-557 |
| Cow position: | chr29:4669122-4668830 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 77, 18 |
| Conread position: | 262-557 |
| Cow position: | chr29:11191317-11191027 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 210 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 268-535 |
| Cow position: | chr29:36055023-36055281 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 71, 12 |
| Conread position: | 283-557 |
| Cow position: | chr29:37065131-37064869 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 283-557 |
| Cow position: | chr29:38865463-38865719 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 34, 15 |
| Conread position: | 284-556 |
| Cow position: | chr29:37996477-37996755 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 81 |
| Conread position: | 297-557 |
| Cow position: | chr29:20672843-20673097 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 115, 67 |
| Conread position: | 330-557 |
| Cow position: | chr29:26737802-26738031 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 72, 34 |
| Conread position: | 332-472 |
| Cow position: | chr29:27058668-27058524 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 333-576 |
| Cow position: | chr29:27060305-27060551 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 378-563 |
| Cow position: | chr29:32149156-32149342 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 158 |
| Conread position: | 383-557 |
| Cow position: | chr29:3841083-3840906 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 15, 154 |
| Conread position: | 387-557 |
| Cow position: | chr29:33557491-33557656 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 115, 84 |
| Conread position: | 403-562 |
| Cow position: | chr29:26644802-26644962 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 92, 113 |
| Conread position: | 405-557 |
| Cow position: | chr29:36478264-36478416 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 90, 129 |
| Conread position: | 409-572 |
| Cow position: | chr29:26945956-26945795 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 94, 43 |
| Conread position: | 422-557 |
| Cow position: | chr29:2121161-2121295 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 79, 111 |
Show alignments to all cow chromosomes.