Cow genome map


           Conread name:
           Ss1.1-Mixn-0004f09.5
        

               Conread position:
               4-537
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 118
               

               Conread position:
               5-147
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               5-531
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 46
               

               Conread position:
               186-555
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 83
               

               Conread position:
               192-376
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               195-562
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 83
               

               Conread position:
               198-558
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 83
               

               Conread position:
               198-558
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 84
               

               Conread position:
               216-491
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               217
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               49, 89
               

               Conread position:
               245-557
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               68, 37
               

               Conread position:
               250-559
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 31
               

               Conread position:
               252-541
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               254-553
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               226
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               45, 22
               

               Conread position:
               260-548
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               237, 29
               

               Conread position:
               261-557
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               101, 18
               

               Conread position:
               264-559
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               25, 13
               

               Conread position:
               270-547
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               93, 5
               

               Conread position:
               281-553
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               113, 34
               

               Conread position:
               281-557
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               101, 60
               

               Conread position:
               282-549
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               81, 168
               

               Conread position:
               289-547
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               227, 19
               

               Conread position:
               289-557
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               96, 17
               

               Conread position:
               302-555
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               201
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               92, 63
               

               Conread position:
               303-541
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               341-558
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               41, 23
               

               Conread position:
               358-558
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               35, 118
               

               Conread position:
               364-558
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               30, 112
               

               Conread position:
               365-557
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               33, 61
               

               Conread position:
               383-558
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               24, 51
               

               Conread position:
               422-557
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.