Cow genome map
| Conread name: | Ss1.1-Mixn-0004f09.5 |
| Conread position: | 4-299 |
| Cow position: | chr7:23799744-23799441 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 283 |
| Conread position: | 5-137 |
| Cow position: | chr7:13846839-13846969 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 22 |
| Conread position: | 146-356 |
| Cow position: | chr7:13847011-13847211 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 133 |
| Conread position: | 170-557 |
| Cow position: | chr7:23928038-23927625 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 116 |
| Conread position: | 181-344 |
| Cow position: | chr7:49294641-49294481 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 192-336 |
| Cow position: | chr7:41085042-41085184 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 25, 40 |
| Conread position: | 192-545 |
| Cow position: | chr7:43870900-43870545 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 58 |
| Conread position: | 192-556 |
| Cow position: | chr7:43568844-43569202 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 195-574 |
| Cow position: | chr7:3168640-3169023 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 83 |
| Conread position: | 216-558 |
| Cow position: | chr7:3663075-3662741 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 65 |
| Conread position: | 245-557 |
| Cow position: | chr7:25127177-25126869 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 228 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 149, 37 |
| Conread position: | 245-557 |
| Cow position: | chr7:43899705-43899393 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 35 |
| Conread position: | 245-558 |
| Cow position: | chr7:49093997-49094314 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 242 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 71, 32 |
| Conread position: | 262-557 |
| Cow position: | chr7:21994543-21994259 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 150, 18 |
| Conread position: | 262-557 |
| Cow position: | chr7:32919208-32919502 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 212 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 150, 18 |
| Conread position: | 272-557 |
| Cow position: | chr7:25967093-25967370 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 140, 8 |
| Conread position: | 277-557 |
| Cow position: | chr7:31117833-31118111 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 117, 21 |
| Conread position: | 283-493 |
| Cow position: | chr7:61510445-61510652 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 111, 70 |
| Conread position: | 283-535 |
| Cow position: | chr7:28335887-28336135 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 10, 82 |
| Conread position: | 285-558 |
| Cow position: | chr7:45939831-45940112 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 68 |
| Conread position: | 289-538 |
| Cow position: | chr7:52896863-52896621 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 48, 25 |
| Conread position: | 291-557 |
| Cow position: | chr7:23795276-23795006 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 103, 71 |
| Conread position: | 293-557 |
| Cow position: | chr7:43051633-43051895 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 54 |
| Conread position: | 303-557 |
| Cow position: | chr7:58445358-58445607 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 113, 61 |
| Conread position: | 303-558 |
| Cow position: | chr7:8606994-8606754 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 192, 22 |
| Conread position: | 308-558 |
| Cow position: | chr7:18108671-18108422 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 29, 54 |
| Conread position: | 318-531 |
| Cow position: | chr7:43181424-43181213 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 321-546 |
| Cow position: | chr7:33468511-33468293 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 104, 43 |
| Conread position: | 332-572 |
| Cow position: | chr7:41085376-41085603 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 53, 81 |
| Conread position: | 335-555 |
| Cow position: | chr7:5343240-5343448 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 70, 6 |
| Conread position: | 362-560 |
| Cow position: | chr7:14403036-14402835 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 32, 17 |
| Conread position: | 369-556 |
| Cow position: | chr7:2128004-2128195 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 7 |
| Conread position: | 373-531 |
| Cow position: | chr7:21994046-21994202 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 38, 99 |
| Conread position: | 373-548 |
| Cow position: | chr7:32874344-32874520 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 29, 114 |
| Conread position: | 375-564 |
| Cow position: | chr7:4699447-4699257 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 124 |
| Conread position: | 406-557 |
| Cow position: | chr7:47884151-47884001 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 57 |
Show alignments to all cow chromosomes.