Cow genome map


           Conread name:
           Ss1.1-Mixn-0004f09.5
        

               Conread position:
               4-147
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               5-169
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 115
               

               Conread position:
               5-298
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 277
               

               Conread position:
               30-170
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               164-555
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 117
               

               Conread position:
               164-556
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 118
               

               Conread position:
               181-409
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               68, 11
               

               Conread position:
               192-519
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               132, 76
               

               Conread position:
               192-540
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 86
               

               Conread position:
               193-558
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 85
               

               Conread position:
               196-534
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               193, 82
               

               Conread position:
               220-557
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 50
               

               Conread position:
               245-548
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               138, 26
               

               Conread position:
               245-548
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               137, 35
               

               Conread position:
               245-557
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               91, 34
               

               Conread position:
               245-557
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               153, 35
               

               Conread position:
               247-456
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               6, 30
               

               Conread position:
               256-442
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               261-574
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               137, 10
               

               Conread position:
               271-557
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               53, 13
               

               Conread position:
               272-547
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               119, 11
               

               Conread position:
               283-528
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               10, 48
               

               Conread position:
               283-548
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               283-560
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 148
               

               Conread position:
               289-557
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               289-557
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               98, 9
               

               Conread position:
               303-491
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               303-557
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               309-544
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               169
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               186, 55
               

               Conread position:
               327-557
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               35, 57
               

               Conread position:
               348-557
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               47, 16
               

               Conread position:
               369-561
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               375-557
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 101
               

               Conread position:
               377-541
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               378-543
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               397-557
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               15, 139
               

               Conread position:
               430-540
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               65, 104
               

               Conread position:
               434-558
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 40
               

               Conread position:
               440-570
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               66, 29
               
Show alignments to all cow chromosomes.