Cow genome map
| Conread name: | Ss1.1-Mixn-0005c15.5 |
| Conread position: | 1994-2307 |
| Cow position: | chr10:55146165-55146455 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 126, 36 |
| Conread position: | 1995-2331 |
| Cow position: | chr10:63690192-63689869 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 250 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 77, 26 |
| Conread position: | 1996-2176 |
| Cow position: | chr10:7408418-7408233 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 118 |
| Conread position: | 1997-2174 |
| Cow position: | chr10:40546738-40546915 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 74, 29 |
| Conread position: | 1997-2215 |
| Cow position: | chr10:27376119-27376344 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 144 |
| Conread position: | 1998-2228 |
| Cow position: | chr10:27413990-27414223 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 36, 109 |
| Conread position: | 1999-2331 |
| Cow position: | chr10:31397703-31397349 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 37, 127 |
| Conread position: | 2004-2176 |
| Cow position: | chr10:6650206-6650383 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 137 |
| Conread position: | 2028-2670 |
| Cow position: | chr10:63711732-63711098 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 458 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 2039-2662 |
| Cow position: | chr10:50723760-50723108 (view UCSC Genome Browser custom track) |
| Alignm length: | 660 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 184 |
| Conread position: | 2040-2328 |
| Cow position: | chr10:31396209-31396505 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 40, 199 |
| Conread position: | 2060-2331 |
| Cow position: | chr10:50729335-50729053 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 23, 67 |
| Conread position: | 2101-2660 |
| Cow position: | chr10:68352011-68351456 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 360 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 40, 18 |
| Conread position: | 2104-2393 |
| Cow position: | chr10:17076721-17077011 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 2143-2429 |
| Cow position: | chr10:52647108-52646831 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 64, 31 |
| Conread position: | 2178-2662 |
| Cow position: | chr10:32324041-32324520 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 6, 22 |
| Conread position: | 2185-2611 |
| Cow position: | chr10:26932520-26932074 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 292 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 25, 79 |
| Conread position: | 2190-2569 |
| Cow position: | chr10:8231471-8231077 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 263 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 58, 46 |
| Conread position: | 2224-2605 |
| Cow position: | chr10:48149971-48150358 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 109, 65 |
| Conread position: | 2243-2568 |
| Cow position: | chr10:40546925-40547261 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 243 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 86, 60 |
| Conread position: | 2340-2659 |
| Cow position: | chr10:63688389-63688085 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 26, 21 |
| Conread position: | 2362-2601 |
| Cow position: | chr10:7407986-7407757 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 2364-2634 |
| Cow position: | chr10:27376481-27376737 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 193 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 2418-2662 |
| Cow position: | chr10:40448644-40448893 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 31, 25 |
| Conread position: | 2431-2662 |
| Cow position: | chr10:28021727-28021495 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 18, 64 |
| Conread position: | 2525-2662 |
| Cow position: | chr10:27967306-27967171 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 34, 10 |
Show alignments to all cow chromosomes.