Cow genome map
| Conread name: | Ss1.1-Mixn-0005c15.5 |
| Conread position: | 1995-2535 |
| Cow position: | chr11:13857502-13858052 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 82 |
| Conread position: | 1996-2184 |
| Cow position: | chr11:8795563-8795757 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 8 |
| Conread position: | 2024-2659 |
| Cow position: | chr11:64124873-64125534 (view UCSC Genome Browser custom track) |
| Alignm length: | 677 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 76 |
| Conread position: | 2039-2330 |
| Cow position: | chr11:33417539-33417821 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 80, 42 |
| Conread position: | 2040-2331 |
| Cow position: | chr11:40620434-40620725 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 2040-2645 |
| Cow position: | chr11:48663024-48662427 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 43 |
| Conread position: | 2041-2462 |
| Cow position: | chr11:32777415-32776985 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 285 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 55, 81 |
| Conread position: | 2041-2468 |
| Cow position: | chr11:37915633-37916066 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 297 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 49, 37 |
| Conread position: | 2060-2228 |
| Cow position: | chr11:68403872-68403705 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 84, 126 |
| Conread position: | 2084-2318 |
| Cow position: | chr11:51329386-51329617 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 2101-2645 |
| Cow position: | chr11:16197898-16197377 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 353 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 2171-2329 |
| Cow position: | chr11:36239450-36239293 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 44, 22 |
| Conread position: | 2222-2659 |
| Cow position: | chr11:72088644-72088201 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 304 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 110, 73 |
| Conread position: | 2278-2670 |
| Cow position: | chr11:39660457-39660847 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 52 |
| Conread position: | 2472-2662 |
| Cow position: | chr11:41459996-41459810 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 7 |
| Conread position: | 2491-2694 |
| Cow position: | chr11:8795974-8796175 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 181, 76 |
| Conread position: | 2492-2636 |
| Cow position: | chr11:40621175-40621318 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 2499-2660 |
| Cow position: | chr11:35732748-35732588 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 54, 83 |
Show alignments to all cow chromosomes.