Cow genome map
| Conread name: | Ss1.1-Mixn-0005c15.5 |
| Conread position: | 1995-2176 |
| Cow position: | chr12:12216894-12216706 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 2033-2659 |
| Cow position: | chr12:42874794-42874202 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 2038-2654 |
| Cow position: | chr12:13025399-13024779 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 2041-2651 |
| Cow position: | chr12:24176315-24176917 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 399 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 2041-2662 |
| Cow position: | chr12:12175394-12176044 (view UCSC Genome Browser custom track) |
| Alignm length: | 673 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 26 |
| Conread position: | 2041-2670 |
| Cow position: | chr12:15383584-15382961 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 432 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 2092-2331 |
| Cow position: | chr12:47270465-47270700 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 2095-2390 |
| Cow position: | chr12:6013808-6014095 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 24, 93 |
| Conread position: | 2173-2653 |
| Cow position: | chr12:30189827-30190313 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 19 |
| Conread position: | 2446-2662 |
| Cow position: | chr12:9233405-9233617 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 2447-2662 |
| Cow position: | chr12:24012328-24012111 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 110, 40 |
| Conread position: | 2461-2662 |
| Cow position: | chr12:20575112-20575311 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 171, 106 |
| Conread position: | 2492-2662 |
| Cow position: | chr12:12009637-12009470 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 2492-2670 |
| Cow position: | chr12:4497909-4497735 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 149, 87 |
Show alignments to all cow chromosomes.