Cow genome map
| Conread name: | Ss1.1-Mixn-0005c15.5 |
| Conread position: | 1004-1635 |
| Cow position: | chr13:32731287-32730653 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 219 |
| Conread position: | 1997-2401 |
| Cow position: | chr13:52190540-52190122 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 200 |
| Conread position: | 2028-2659 |
| Cow position: | chr13:20086751-20087378 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 431 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 55, 87 |
| Conread position: | 2036-2659 |
| Cow position: | chr13:42570692-42571313 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 270 |
| Conread position: | 2037-2330 |
| Cow position: | chr13:5273925-5274212 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 48, 55 |
| Conread position: | 2041-2229 |
| Cow position: | chr13:12243299-12243488 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 46, 58 |
| Conread position: | 2041-2327 |
| Cow position: | chr13:42029272-42029554 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 103, 46 |
| Conread position: | 2041-2662 |
| Cow position: | chr13:31494527-31495145 (view UCSC Genome Browser custom track) |
| Alignm length: | 654 |
| Alignm identity: | 443 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 42 |
| Conread position: | 2041-2670 |
| Cow position: | chr13:19546706-19546085 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 41 |
| Conread position: | 2045-2444 |
| Cow position: | chr13:19534206-19534617 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 278 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 44, 79 |
| Conread position: | 2046-2568 |
| Cow position: | chr13:16570614-16571133 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 340 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 30, 127 |
| Conread position: | 2049-2329 |
| Cow position: | chr13:47645164-47645447 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 211 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 33, 139 |
| Conread position: | 2107-2662 |
| Cow position: | chr13:41842973-41843529 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 371 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 2120-2659 |
| Cow position: | chr13:34348251-34348812 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 144 |
| Conread position: | 2171-2635 |
| Cow position: | chr13:61031173-61030702 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 316 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 42, 14 |
| Conread position: | 2221-2670 |
| Cow position: | chr13:12484591-12485053 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 24 |
| Conread position: | 2244-2659 |
| Cow position: | chr13:30765565-30765978 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 298 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 58, 29 |
| Conread position: | 2333-2670 |
| Cow position: | chr13:47645469-47645787 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 2450-2662 |
| Cow position: | chr13:15591407-15591196 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 105, 28 |
| Conread position: | 2498-2662 |
| Cow position: | chr13:646188-646348 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 2503-2678 |
| Cow position: | chr13:20606635-20606805 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 133, 13 |
Show alignments to all cow chromosomes.