Cow genome map
| Conread name: | Ss1.1-Mixn-0005c15.5 |
| Conread position: | 1625-1809 |
| Cow position: | chr15:8461642-8461821 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 73, 63 |
| Conread position: | 1799-2006 |
| Cow position: | chr15:8462115-8462320 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 59, 48 |
| Conread position: | 1998-2568 |
| Cow position: | chr15:3033262-3033802 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 60 |
| Conread position: | 1998-2638 |
| Cow position: | chr15:8709722-8709084 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 60 |
| Conread position: | 2027-2670 |
| Cow position: | chr15:36524726-36525386 (view UCSC Genome Browser custom track) |
| Alignm length: | 675 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 2041-2625 |
| Cow position: | chr15:8453136-8453717 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 15 |
| Conread position: | 2119-2691 |
| Cow position: | chr15:8982990-8983553 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 389 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 25, 47 |
| Conread position: | 2119-2711 |
| Cow position: | chr15:37365222-37364643 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 391 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 2171-2662 |
| Cow position: | chr15:27126797-27126303 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 338 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 2193-2670 |
| Cow position: | chr15:15214364-15213883 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 63 |
| Conread position: | 2293-2671 |
| Cow position: | chr15:32222518-32222896 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 125 |
| Conread position: | 2343-2567 |
| Cow position: | chr15:42610683-42610910 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 12, 20 |
| Conread position: | 2440-2670 |
| Cow position: | chr15:11210346-11210120 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 37, 53 |
| Conread position: | 2441-2634 |
| Cow position: | chr15:36108037-36107847 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 51 |
Show alignments to all cow chromosomes.