Cow genome map
| Conread name: | Ss1.1-Mixn-0005c15.5 |
| Conread position: | 1756-1888 |
| Cow position: | chr16:42049902-42050032 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 1997-2176 |
| Cow position: | chr16:30712857-30712670 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 34, 171 |
| Conread position: | 2004-2599 |
| Cow position: | chr16:9575302-9574685 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 74 |
| Conread position: | 2038-2662 |
| Cow position: | chr16:24571613-24570946 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 445 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 44, 90 |
| Conread position: | 2039-2639 |
| Cow position: | chr16:27159709-27159108 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 161 |
| Conread position: | 2041-2229 |
| Cow position: | chr16:18288574-18288384 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 39, 98 |
| Conread position: | 2041-2634 |
| Cow position: | chr16:49898852-49898259 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 408 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 41, 37 |
| Conread position: | 2051-2206 |
| Cow position: | chr16:56599606-56599449 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 2171-2670 |
| Cow position: | chr16:52928618-52928111 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 2221-2662 |
| Cow position: | chr16:19711568-19711142 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 25 |
| Conread position: | 2230-2555 |
| Cow position: | chr16:52824321-52824635 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 221 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 86, 37 |
| Conread position: | 2283-2671 |
| Cow position: | chr16:18288152-18287780 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 263 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 49, 24 |
| Conread position: | 2333-2661 |
| Cow position: | chr16:51098578-51098258 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 8, 42 |
| Conread position: | 2440-2662 |
| Cow position: | chr16:9252459-9252238 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 37 |
| Conread position: | 2467-2634 |
| Cow position: | chr16:56599354-56599190 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 2498-2662 |
| Cow position: | chr16:32173873-32174034 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 159, 72 |
Show alignments to all cow chromosomes.