Cow genome map
| Conread name: | Ss1.1-Mixn-0005c15.5 |
| Conread position: | 1705-2051 |
| Cow position: | chr17:22512267-22511938 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 142, 34 |
| Conread position: | 1997-2662 |
| Cow position: | chr17:20193777-20194431 (view UCSC Genome Browser custom track) |
| Alignm length: | 687 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 163 |
| Conread position: | 1998-2109 |
| Cow position: | chr17:30148798-30148909 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2039-2634 |
| Cow position: | chr17:14609751-14610370 (view UCSC Genome Browser custom track) |
| Alignm length: | 629 |
| Alignm identity: | 384 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 2107-2598 |
| Cow position: | chr17:17902319-17902824 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 89 |
| Conread position: | 2169-2670 |
| Cow position: | chr17:21613826-21613334 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 337 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 20, 9 |
| Conread position: | 2171-2638 |
| Cow position: | chr17:38874735-38875211 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 21 |
| Conread position: | 2224-2659 |
| Cow position: | chr17:20317945-20318384 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 164 |
| Conread position: | 2240-2606 |
| Cow position: | chr17:1554288-1554639 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 2240-2664 |
| Cow position: | chr17:31996981-31996563 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 80 |
| Conread position: | 2246-2607 |
| Cow position: | chr17:43466348-43465965 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 263 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 88, 303 |
| Conread position: | 2339-2639 |
| Cow position: | chr17:30149104-30149395 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 58 |
| Conread position: | 2418-2670 |
| Cow position: | chr17:1230334-1230581 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 2423-2670 |
| Cow position: | chr17:22520099-22519851 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 2436-2662 |
| Cow position: | chr17:18888260-18888039 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 60 |
| Conread position: | 2498-2683 |
| Cow position: | chr17:22872906-22873086 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 175, 11 |
Show alignments to all cow chromosomes.