Cow genome map


           Conread name:
           Ss1.1-Mixn-0005c15.5
        

               Conread position:
               1620-1903
               

               Cow position:
               chr23:6592139-6591872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               132, 25
               

               Conread position:
               1756-1911
               

               Cow position:
               chr23:6722041-6721886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               100, 91
               

               Conread position:
               1996-2182
               

               Cow position:
               chr23:15609745-15609936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               2041-2510
               

               Cow position:
               chr23:41244065-41243618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               309
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               103, 57
               

               Conread position:
               2042-2674
               

               Cow position:
               chr23:20076752-20076118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               653
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 40
               

               Conread position:
               2043-2448
               

               Cow position:
               chr23:2501205-2501615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               272
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               31, 131
               

               Conread position:
               2083-2205
               

               Cow position:
               chr23:10724340-10724464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               2128-2662
               

               Cow position:
               chr23:5914264-5914819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               564
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 135
               

               Conread position:
               2238-2601
               

               Cow position:
               chr23:15609933-15610295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 118
               

               Conread position:
               2242-2554
               

               Cow position:
               chr23:31111249-31111573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               90, 17
               
Show alignments to all cow chromosomes.